Previous Contig 011773:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014C11Sequence479008004 (4)gb:AX772727_14748933e-19Sequence 1 from Patent EP1318192.>gb:AX776322_1475333 Sequence 1 from Patent WO0800011773 (2)gb:AX772727_14748935e-95Sequence 1 from Patent EP1318192.>gb:AX776322_1475333 Sequence 1 from Patent WO0
JMSF050O23Sequence653008004 (4)gb:AX772727_14748931e-51Sequence 1 from Patent EP1318192.>gb:AX776322_1475333 Sequence 1 from Patent WO0648011773 (2)gb:AX772727_14748938e-71Sequence 1 from Patent EP1318192.>gb:AX776322_1475333 Sequence 1 from Patent WO0

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF014C11+ TCTGCATGGATCTTGGTTAT
                      ____________________________________________________________
consensus TCTGCATGGATCTTGGTTAT
 
. : . : . : . : . : . :
rJMSF014C11+ ANTTTTTGCTGNGGCAGGACTGTTTATAGTTGGGATGAACTTTGGTTCGTTCATTTGTTC
                      ____________________________________________________________
consensus ANTTTTTGCTGNGGCAGGACTGTTTATAGTTGGGATGAACTTTGGTTCGTTCATTTGTTC
 
. : . : . : . : . : . :
rJMSF014C11+ TCTTTATGCTCTTGGTCTCTTCCTGGGCACCATCTACTCTGTACCCCCGTTTCGCTTGAA
                      ____________________________________________________________
consensus TCTTTATGCTCTTGGTCTCTTCCTGGGCACCATCTACTCTGTACCCCCGTTTCGCTTGAA
 
. : . : . : . : . : . :
rJMSF014C11+ GAGATTTCCAATTTTAGCATTTCTAATCATCGCCACGGTACGGGGTTTTCTCCTTAATTA
                      ____________________________________________________________
consensus GAGATTTCCAATTTTAGCATTTCTAATCATCGCCACGGTACGGGGTTTTCTCCTTAATTA
 
. : . : . : . : . : . :
rJMSF050O23+ AGCTCACCCGT
rJMSF014C11+ TGGCGTCTATTATGCCACAAGAGCAGCTCTGGGGTTAAGCTTTGAATGGAGCTCACCCGT
                      ____________________________________________________________
consensus TGGCGTCTATTATGCCACAAGAGCAGCTCTGGGGTTAAGCTTTGAATGGAGCTCACCCGT
 
. : . : . : . : . : . :
rJMSF050O23+ GGCTTTCATTACAACTTTTGTCACGTTATTTGCTTTGGTTATTGCCATAACTAAGGATCT
rJMSF014C11+ GGCTTTCATTACAACTTTTGTCACGTTATTTGCTTTGGTTATTGCCATAACTAAGGATCT
                      ____________________________________________________________
consensus GGCTTTCATTACAACTTTTGTCACGTTATTTGCTTTGGTTATTGCCATAACTAAGGATCT
 
. : . : . : . : . : . :
rJMSF050O23+ GCCCGATGTAGAAGGTGACCGAAAGTTTCAAATTTCTACTTTCGCTACTAAGCTTGGCGT
rJMSF014C11+ GCCCGATGTAGAAGGTGACCGAAAGTTTCAAATTTCTACTTTCGCTACTAAGCTTGGCGT
                      ____________________________________________________________
consensus GCCCGATGTAGAAGGTGACCGAAAGTTTCAAATTTCTACTTTCGCTACTAAGCTTGGCGT
 
. : . : . : . : . : . :
rJMSF050O23+ GAGGAACATAGCATTCATGGGCTCGGGGCTCTTGTTGGTAAATTACATCGGTGCTGTATT
rJMSF014C11+ GAGGAACATAGCATTCATGGGCTCGGGGCTCTTGTTGGTAAATTACATCGGTGCTGTATT
                      ____________________________________________________________
consensus GAGGAACATAGCATTCATGGGCTCGGGGCTCTTGTTGGTAAATTACATCGGTGCTGTATT
 
. : . : . : . : . : . :
rJMSF050O23+ GGCTGCAATTTACATGCCTCATGCTTTCAGGAGCCGGTTGATGATACCATTTCATGCAGT
rJMSF014C11+ GGCTGCAATTTACATGCCTCATGCTTTCAGGAGCCGGTTGATGATACCATTTCATGCAGT
                      ____________________________________________________________
consensus GGCTGCAATTTACATGCCTCATGCTTTCAGGAGCCGGTTGATGATACCATTTCATGCAGT
 
. : . : . : . : . : . :
rJMSF050O23+ CTTGGCAGTATGCTTAGTTTTCCAGACCTGGTTACTGGAAAAAGCGAACTATACTAAGGA
rJMSF014C11+ CTTGGCAGTATGCTTAGTTTTCCAGACCTGGTTACTGGAAAAAGCGAACTATACTAAGGA
                      ____________________________________________________________
consensus CTTGGCAGTATGCTTAGTTTTCCAGACCTGGTTACTGGAAAAAGCGAACTATACTAAGGA
 
. : . : . : . : . : . :
rJMSF050O23+ AGCAATTTCAGCATTCTACCGGTTTATATGGAATCTCTTCTACGCAGAGTATTTGCTATT
rJMSF014C11+ AGCAATTTCAGCATTCTACCGGTTTATATGGAATCTCTTCTACGCAGAGTATTTGCTATT
                      ____________________________________________________________
consensus AGCAATTTCAGCATTCTACCGGTTTATATGGAATCTCTTCTACGCAGAGTATTTGCTATT
 
. : . : . : . : . : . :
rJMSF050O23+ CCCTTTCATCTAACGTGTAAGTTTCATTAGTGTCGGGAAATTTTTTCGAGGGCCATGGTT
rJMSF014C11+ CCCTTTCATCTAACGTGTAAGTTTCATTAGTGTCGGGAAATTTTTTCGAGGGCCATGGTT
                      ____________________________________________________________
consensus CCCTTTCATCTAACGTGTAAGTTTCATTAGTGTCGGGAAATTTTTTCGAGGGCCATGGTT
 
. : . : . : . : . : . :
rJMSF050O23+ TAGCAGAGAAAGAGACAGTGTAGTATCTGTTTTATATATTTTCTCAATTAGTTGTAGCTC
rJMSF014C11+ TAGCAGAGAAAGAGACAGTGTAGTATCTGTTTTATATATTTTCTCAATTAGTTGTAGCTC
                      ____________________________________________________________
consensus TAGCAGAGAAAGAGACAGTGTAGTATCTGTTTTATATATTTTCTCAATTAGTTGTAGCTC
 
. : . : . : . : . : . :
rJMSF050O23+ AAATAGTCAATACTTCACCACAGAGAAAGAGACCAGTGTAGTATCTGTGCAATGTGTATA
rJMSF014C11+ AAATAGTCAATACTTCACCACAGAGAAAGAGACCAGTGTAGTATCTGTGCAATGTGTATA
                      ____________________________________________________________
consensus AAATAGTCAATACTTCACCACAGAGAAAGAGACCAGTGTAGTATCTGTGCAATGTGTATA