Previous Contig 011690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019L20Sequence535000992 (3)706011690 (2)
JMSF012H08Sequence226000992 (3)731011690 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF012H08+ GTGAGGAGAGG
                      ____________________________________________________________
consensus GTGAGGAGAGG
 
. : . : . : . : . : . :
rJMFF019L20+ AACCGTGGGGGAAGGGAAGGTTCCAGAAGATACAATCAACAGATTGT
rJMSF012H08+ AATCATCTCCAACAACCGTGGGGGAAGGGAAGGTTCCAGAAGATACAATCAACAGATTGT
                      ____________________________________________________________
consensus AATCATCTCCAACAACCGTGGGGGAAGGGAAGGTTCCAGAAGATACAATCAACAGATTGT
 
. : . : . : . : . : . :
rJMFF019L20+ TAGAGTGTTCACAGAGGAAGGAAGCTTTTCACCCTTTTCCAGTAGAGCTGGTGATATTTC
rJMSF012H08+ TAGAGTGTTCACAGAGGAAGGAAGCTTTTCACCCTTTTCCAGTAGAGCTGGTGATATTTC
                      ____________________________________________________________
consensus TAGAGTGTTCACAGAGGAAGGAAGCTTTTCACCCTTTTCCAGTAGAGCTGGTGATATTTC
 
. : . : . : . : . : . :
rJMFF019L20+ TTTACCACCCCAAAAGAGATCTCGTTCTCCTCATGCATGGTACCCACAAAGAGAGAGGAT
rJMSF012H08+ TTTACCACCCCAAAAGAGATCTCGTTCTCCTCATGCATGGTACCCACAAAGAGAGAGGAT
                      ____________________________________________________________
consensus TTTACCACCCCAAAAGAGATCTCGTTCTCCTCATGCATGGTACCCACAAAGAGAGAGGAT
 
. : . : . : . : . : . :
rJMFF019L20+ TCTGAGAACAAGACCAAACAGATCTCCAGATTCAAGAATGGAGAGAAGTCGAGTTCCTTT
rJMSF012H08+ TCTGAGAACAAGACCAAACAGATCTCCAGATTCAAGAATGGAGAGAAGTCGAGTTCCTTT
                      ____________________________________________________________
consensus TCTGAGAACAAGACCAAACAGATCTCCAGATTCAAGAATGGAGAGAAGTCGAGTTCCTTT
 
. : . : . : . : . : . :
rJMFF019L20+ CCAAAAGTATCGCCATCCAGAAGGTTTCGTATCTCCTACCAACAACCACCAGGATTCTAG
rJMSF012H08+ CCAAAAGTATCGCCATCCAGAAGGTTTCGTATCTCCTACCAACAACCACCAGGATTCTAG
                      ____________________________________________________________
consensus CCAAAAGTATCGCCATCCAGAAGGTTTCGTATCTCCTACCAACAACCACCAGGATTCTAG
 
. : . : . : . : . : . :
rJMFF019L20+ ATATCGCAATCCTGTTGACAACCATTTGAGACACAAGAGATCAAATATGGTGGGCAACAT
rJMSF012H08+ ATATCGCAATCCTGTTGACAACCATTTGAGACACAAGAGATCAAATATGGTGGGCAACAT
                      ____________________________________________________________
consensus ATATCGCAATCCTGTTGACAACCATTTGAGACACAAGAGATCAAATATGGTGGGCAACAT
 
. : . : . : . : . : . :
rJMFF019L20+ TAAAAGGACAAGCCAAAGATTTGATGATCCTGGAACAGTGAAGCCAGATGATTACTTTAG
rJMSF012H08+ TAAAAGGACAAGCCAAAGATTTGATGATCCTGGAACAGTGAAGCCAGATGATTACTTTAG
                      ____________________________________________________________
consensus TAAAAGGACAAGCCAAAGATTTGATGATCCTGGAACAGTGAAGCCAGATGATTACTTTAG
 
. : . : . : . : . : . :
rJMFF019L20+ GCCTGAGAGGATAACAACGGGAAGATTCCCTCCAGAAAGGGTATTTAAATTGGAGGAGAG
rJMSF012H08+ GCCTGAGAGGATAACAACGGGAAGATTCCCTCCAGAAAGGGTATTTAAATTGGAGGAGAG
                      ____________________________________________________________
consensus GCCTGAGAGGATAACAACGGGAAGATTCCCTCCAGAAAGGGTATTTAAATTGGAGGAGAG
 
. : . : . : . : . : . :
rJMFF019L20+ TAGTAATTTCAAGAGACGTGATAGCAGCAGATATGAGATGATGCAAGAAGGTAGACATTT
rJMSF012H08+ TAGTAATTTCAAGAGACGTGATAGCAGCAGATATGAGATGATGCAAGAAGGTAGACATTT
                      ____________________________________________________________
consensus TAGTAATTTCAAGAGACGTGATAGCAGCAGATATGAGATGATGCAAGAAGGTAGACATTT
 
. : . : . : . : . : . :
rJMFF019L20+ TGATGCCGATGATAACTACAAAGGCAGCATGCAACCCTCAGACCATTGAAGAATTCCATT
rJMSF012H08+ TGATGCCGATGATAACTACAAAGGCAGCATGCAACCCTCAGACCATTGAAGAATTCCATT
                      ____________________________________________________________
consensus TGATGCCGATGATAACTACAAAGGCAGCATGCAACCCTCAGACCATTGAAGAATTCCATT
 
. : . : . : . : . : . :
rJMFF019L20+ GTGCTGCTGACCAAAGACTGCTAGGAAAAATGTGTCCTCTTAATATACACAAACTATAGT
rJMSF012H08+ GTGCTGCTGACCAAAGACTGCTAGGAAAAATGTGTCCTCTTAATATACACAAACTATAGT
                      ____________________________________________________________
consensus GTGCTGCTGACCAAAGACTGCTAGGAAAAATGTGTCCTCTTAATATACACAAACTATAGT
 
. : . : . : . : . : . :
rJMFF019L20+ CGGACTTGCTGTCCATTATATTTTCATATAGTTCTAGAATTAATTTTGCTTATCAATCT
rJMSF012H08+ CGGACTTGCTGTCCATTATATTTTCATATAGTTCTAGAATTAATTTTGCTTATCAATCTA
                      ____________________________________________________________
consensus CGGACTTGCTGTCCATTATATTTTCATATAGTTCTAGAATTAATTTTGCTTATCAATCTA