Previous Contig 011401:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007M14+                                                          AAGTCCAAATAC
                      ____________________________________________________________
consensus                                                             AAGTCCAAATAC
 
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rJMSF011E12+                                AGGGAAAGGATATAGGCTTTATGTTGGGGGATGTCAAG
rJMSF007M14+          GATGAAATTGCAGCGTTTTATAAGGGAAAGGATATAGGCTTTATGTTGGGGGATGTCAAG
                      ____________________________________________________________
consensus             GATGAAATTGCAGCGTTTTATAAGGGAAAGGATATAGGCTTTATGTTGGGGGATGTCAAG
 
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rJMSF011E12+          TCCAGTGGTGGTGTGTTTCAGTACTTTAAAGTGCACGAGGATCAGGCACCTCTTGTCTTA
rJMSF007M14+          TCCAGTGGTGGTGTGTTTCAGTACTTTAAAGTGCACGAGGATCAGGCACCTCTTGTCTTA
                      ____________________________________________________________
consensus             TCCAGTGGTGGTGTGTTTCAGTACTTTAAAGTGCACGAGGATCAGGCACCTCTTGTCTTA
 
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rJMSF011E12+          GGACAGACAAATGAGGGCGAAAAATATCTCAAGCCAAATGTGGAACNTGATCAAATTGCA
rJMSF007M14+          GGACAGACAAATGAGGGCGAAAAATATCTCAAGCCAAATGTGGAACCTGATCAAATTGCA
                      ____________________________________________________________
consensus             GGACAGACAAATGAGGGCGAAAAATATCTCAAGCCAAATGTGGAACCTGATCAAATTGCA
 
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rJMSF011E12+          ACTTGGGTAAAGGACTTCAAGGACGGTAAGTTGAAGCCATTTCTAAGCTCAGAGCCTATT
rJMSF007M14+          ACTTGGGTAAAGGACTTCAAGGACGGTAAGTTGAAGCCATTTCTAAGCTCAGAGCCCATT
                      ____________________________________________________________
consensus             ACTTGGGTAAAGGACTTCAAGGACGGTAAGTTGAAGCCATTTCTAAGCTCAGAGCCTATT
 
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rJMSF011E12+          CCCGAGAACAACAGCCAACCAGTGAAGGTTGTTGTCACTGATAGCCTTGAGGAAATGGTA
rJMSF007M14+          CCCGAGAACAACAGCCAACCAGTGAAGGTTGTTGTCACTGATAGCCTTGAGGAAATGGTA
                      ____________________________________________________________
consensus             CCCGAGAACAACAGCCAACCAGTGAAGGTTGTTGTCACTGATAGCCTTGAGGAAATGGTA
 
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rJMSF011E12+          TTTAACTCAGGAAAGAATGTTCTACTGGAATTTTATGCTCCTTGGTGTGGCCACTGCAAG
rJMSF007M14+          TTTAACTCAGGAAAGAATGTTCTACTGGAATTTTATGCTCCTTGGTGTGGCCACTGCAAG
                      ____________________________________________________________
consensus             TTTAACTCAGGAAAGAATGTTCTACTGGAATTTTATGCTCCTTGGTGTGGCCACTGCAAG
 
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rJMSF011E12+          CAGCTAGCTCCAATCTTGGATGAAGTCGCAATCTCACTTGAGAATGATCCCAATGTCATG
rJMSF007M14+          CAGCTAGCTCCAATCTTGGATGAAGTCGCAATCTCACTTGAGAATGATCCCAATGTCATG
                      ____________________________________________________________
consensus             CAGCTAGCTCCAATCTTGGATGAAGTCGCAATCTCACTTGAGAATGATCCCAATGTCATG
 
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rJMSF011E12+          ATTGCAAAACTAGATGGAACCGCGAATGATATCCCGAAAGGGAAGTTTGAAGTTAAAGGA
rJMSF007M14+          ATTGCAAAACTAGATGGAACCGCGAATGATATCCCGAAAGGGAAGTTTGAAGTTAAAGGA
                      ____________________________________________________________
consensus             ATTGCAAAACTAGATGGAACCGCGAATGATATCCCGAAAGGGAAGTTTGAAGTTAAAGGA
 
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rJMSF011E12+          TACCCAACTCTGTACTTCAAATCTGCATCTGGTAACCTGTTGCAATATGAAGGCAATAGA
rJMSF007M14+          TACCCAACTCTGTACTTCAAATCTGCATCTGGTAACCTGTTGCAATATGAAGGCAATAGA
                      ____________________________________________________________
consensus             TACCCAACTCTGTACTTCAAATCTGCATCTGGTAACCTGTTGCAATATGAAGGCAATAGA
 
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rJMSF011E12+          ACAAAGGAGGACATTATTGACTTTATCCACAAGAACAGGGACAAGACTATCCAATCAGGC
rJMSF007M14+          ACAAAGGAGGACATTATTGACTTTATCCACAAGAACAGGGACAAGACTATCCAATCAGGC
                      ____________________________________________________________
consensus             ACAAAGGAGGACATTATTGACTTTATCCACAAGAACAGGGACAAGACTATCCAATCAGGC
 
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rJMSF011E12+          TCTGCAACATCTGAAGAACCATCCAAGGAGGAGCTGTAAGAAGGTTTGAAGATTTTGAGG
rJMSF007M14+          TCTGCAACATCTGAAGAACCATCCAAGGAGGAGCTGTAAGAAGGTTTGAAGATTTTGAGG
                      ____________________________________________________________
consensus             TCTGCAACATCTGAAGAACCATCCAAGGAGGAGCTGTAAGAAGGTTTGAAGATTTTGAGG
 
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rJMSF011E12+          CTAGTTCGAGTTTGTGTCTGTTGCGGAACTGAATAAAATGCTAGGCATGTAACACTTGTA
rJMSF007M14+          CTAGTTCGAGTTTGTGTCTGTTGCGGAACTGAATAAAATGCTAGGCATGTAACACTTGTA
                      ____________________________________________________________
consensus             CTAGTTCGAGTTTGTGTCTGTTGCGGAACTGAATAAAATGCTAGGCATGTAACACTTGTA
 
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rJMSF011E12+          GCATTTCCAATCTTGGGGTTGGGGTGTTTTCAGTTAGGCTGTTAGCCC            
rJMSF007M14+          GCATTTCCAATCTTGGGGTTGGGGTGTTTTCAGTTA-GCTGTTAGCCCCTACCTCGTACC
                      ____________________________________________________________
consensus             GCATTTCCAATCTTGGGGTTGGGGTGTTTTCAGTTAGGCTGTTAGCCCCTACCTCGTACC