Previous Contig 011334:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005P10Sequence358011334 (2)pir|T46132|T461327e-23hypothetical protein T2J13.180 - Arabidopsis thaliana>gb:ATT2J13_1555709 Arabido
JMSF031A06Sequence634004669 (2)pir|T46132|T461321e-20hypothetical protein T2J13.180 - Arabidopsis thaliana>gb:ATT2J13_1555709 Arabido768011334 (2)pir|T46132|T461324e-81hypothetical protein T2J13.180 - Arabidopsis thaliana>gb:ATT2J13_1555709 Arabido

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF031A06+ AGGATGNAGCTCCTCAAGTGCAATGTCTCCGACAATCTGGACTGGAAT
                      ____________________________________________________________
consensus AGGATGNAGCTCCTCAAGTGCAATGTCTCCGACAATCTGGACTGGAAT
 
. : . : . : . : . : . :
rJMSF031A06+ GCCCGTCTTTACGCTCAGGATTGGAACATAGCAACTGAACAAGGATTCAACGACACAGAC
                      ____________________________________________________________
consensus GCCCGTCTTTACGCTCAGGATTGGAACATAGCAACTGAACAAGGATTCAACGACACAGAC
 
. : . : . : . : . : . :
rJMSF031A06+ TTGACAGAGCAGTGTAATCATAGGTACAAAATTTATATCGAAGGATCTGCTTACGCTGTC
                      ____________________________________________________________
consensus TTGACAGAGCAGTGTAATCATAGGTACAAAATTTATATCGAAGGATCTGCTTACGCTGTC
 
. : . : . : . : . : . :
rJMSF031A06+ AGCCAAAGGAACATTCTCGCTTGTAATTCACTCGCGTTACTAGTCAAGCCCCGTTATTAC
                      ____________________________________________________________
consensus AGCCAAAGGAACATTCTCGCTTGTAATTCACTCGCGTTACTAGTCAAGCCCCGTTATTAC
 
. : . : . : . : . : . :
rJMSF031A06+ AATTTCTTCTCGAGAAGTTTGGTGCCCATAAAACATTACTGGCCTATAAGGGACGACGAC
                      ____________________________________________________________
consensus AATTTCTTCTCGAGAAGTTTGGTGCCCATAAAACATTACTGGCCTATAAGGGACGACGAC
 
. : . : . : . : . : . :
rJMSF031A06+ ACATGCAGGTCTATCAAATTCGCGGTCGACTGGGGCAACAGCCACAAGAAAAAGGCGCAG
                      ____________________________________________________________
consensus ACATGCAGGTCTATCAAATTCGCGGTCGACTGGGGCAACAGCCACAAGAAAAAGGCGCAG
 
. : . : . : . : . : . :
rJMSF031A06+ GAAATTGGTAACGCTGCAAGTGCTTTCGTCGAAGAGGATTTGAAGATGGATTACGTGTAC
                      ____________________________________________________________
consensus GAAATTGGTAACGCTGCAAGTGCTTTCGTCGAAGAGGATTTGAAGATGGATTACGTGTAC
 
. : . : . : . : . : . :
rJMSF031A06+ GACTACATGTTTCATCTCTTGAACCAATACGCTAAGCTGCTAAGGTACAAGCCGAGTATA
rJMSF005P10+ CTACATGTTTCATCTCNTGAACCAATACGCTAAGCTGCTAAGGTACAAGCCGAGTATA
                      ____________________________________________________________
consensus GACTACATGTTTCATCTCTTGAACCAATACGCTAAGCTGCTAAGGTACAAGCCGAGTATA
 
. : . : . : . : . : . :
rJMSF031A06+ CCTGAAAATGCGAGAGAGCTTTGCTCTGAGGCAATAGCGTGTTCTGCAGACGGGTTGCAG
rJMSF005P10+ CCTGAAAATGCGAGAGAGCTTTGCTCTGAGGCAATAGCGTGTTCTGCAGACGGGTTGCAG
                      ____________________________________________________________
consensus CCTGAAAATGCGAGAGAGCTTTGCTCTGAGGCAATAGCGTGTTCTGCAGACGGGTTGCAG
 
. : . : . : . : . : . :
rJMSF031A06+ AAGAGTTTCATGCTAGAATCTATGGCGTCGGGACCAAAAATCACAAACCCGTGCTTCCCT
rJMSF005P10+ AAGAGTTTCATGCTAGAATCTATGGCGTCGGGACCAAAAATCACAAACCCGTGCTTCCCT
                      ____________________________________________________________
consensus AAGAGTTTCATGCTAGAATCTATGGCGTCGGGACCAAAAATCACAAACCCGTGCTTCCCT
 
. : . : . : . : . : . :
rJMSF031A06+ CCCATTCCGTTCTATGAGTCTGAGCTCGATTCGATGTTTAGACAAAAAGTTTCTACTATA
rJMSF005P10+ CCCATTCCGTTCTATGAGTCTGAGCTCGATTCGATGTTTAGACAAAAAGTTTCTACTATA
                      ____________________________________________________________
consensus CCCATTCCGTTCTATGAGTCTGAGCTCGATTCGATGTTTAGACAAAAAGTTTCTACTATA
 
. : . : . : . : . : . :
rJMSF031A06+ CAGCAAGTAGAGCATTGGGAGAACAAGTACTGGGAGAACCAAGAACCTAAGACATAGAAA
rJMSF005P10+ CAGCAAGTAGAGCATTGGGAGAACAAGTACTGGGAGAACCAAGAACCTAAGACATAGAAA
                      ____________________________________________________________
consensus CAGCAAGTAGAGCATTGGGAGAACAAGTACTGGGAGAACCAAGAACCTAAGACATAGAAA
 
. : . : . : . : . : . :
rJMSF031A06+ TGTAGCAGTAGCAGTAGTAGTATTATTGATAGCCCTATATATATGGATTATGAATCAAAC
rJMSF005P10+ TGTAGCNGTAGCAGTAGTAGTATTATTGATAGCCCTATATATATGGATTATGAATCAAAC
                      ____________________________________________________________
consensus TGTAGCAGTAGCAGTAGTAGTATTATTGATAGCCCTATATATATGGATTATGAATCAAAC