Previous Contig 010781:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF047N23-                                                 CTGAGGAAAAAAAGAAGAGAGA
                      ____________________________________________________________
consensus                                                   CTGAGGAAAAAAAGAAGAGAGA
 
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JMFF047N23-           ATTGGGAAAAAAAACATTTAAAAACATTTTCCCGATTTCTCAGTGGCTTAGCTCTCACTT
                      ____________________________________________________________
consensus             ATTGGGAAAAAAAACATTTAAAAACATTTTCCCGATTTCTCAGTGGCTTAGCTCTCACTT
 
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JMFF047N23-           CCAGCTCTCTGTTTGAAAGXXXXXXXXXXXXXXXXXXXXXXGCTTATTTTTTTCTGAAAA
JMSF024K05-                                                    GCTTATTTTTTTCTGAAAA
                      ____________________________________________________________
consensus             CCAGCTCTCTGTTTGAAAGNNNNNNNNNNNNNNNNNNNNNNGCTTATTTTTTTCTGAAAA
 
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JMFF047N23-           ATGGGTGTCAAAGATATGGACCCGCTTTCGCAGCTGAGTTTGCCGCCGGGTTTCCGGTTT
JMSF024K05-           ANGGGNGTCAAANATATGGACCCGCTTTCNCAGCTGAGTTTGCCNCCGGGTTTCCGGTTT
                      ____________________________________________________________
consensus             ATGGGTGTCAAAGATATGGACCCGCTTTCGCAGCTGAGTTTGCCGCCGGGTTTCCGGTTT
 
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JMFF047N23-           TACCCGACAGACGAGGAGCTTTTGGTGCAGTACTTGTGTAGAAAGGTGGCTGGGCATGAC
JMSF024K05-           TACCCGACAGACGAGGAGCTTTTGGNGCAGTACTTGTGTANAAAGGNGGCTGGGCATGAC
                      ____________________________________________________________
consensus             TACCCGACAGACGAGGAGCTTTTGGTGCAGTACTTGTGTAGAAAGGTGGCTGGGCATGAC
 
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JMFF047N23-           TTTTCTCTGCAGATCATCGGAGACATCGACTTGTACAAGTTTGATCCGTGGGATCTTCCT
JMSF024K05-           TTTTCTCTGCANATCATCGGANACATCGACTTGTACAAGTTTGATCCGNGGGATCTTCCT
                      ____________________________________________________________
consensus             TTTTCTCTGCAGATCATCGGAGACATCGACTTGTACAAGTTTGATCCGTGGGATCTTCCT
 
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JMFF047N23-           AGCAGGGCGAATTTCGGGGAAAAAGAATGGTATTTTTTCAGCCCACGAGATCGGAAATAT
JMSF024K05-           AGCAGGGCGAATTTCGGGGAAAAANAATGGTATTTTTTCAGCCCACGANATCGGAAATAT
                      ____________________________________________________________
consensus             AGCAGGGCGAATTTCGGGGAAAAAGAATGGTATTTTTTCAGCCCACGAGATCGGAAATAT
 
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JMFF047N23-           CCGAATGGGTCGAGGCCGAATAGAGTCGCCGGTTCCGGCTACTGGAAAGCCACCGGAACC
JMSF024K05-           CCNAATGGGTCNAGGCCNAANANAGTCNCCGGTTCCGGCTACNGGAAAGCCNCCGGAACC
rJMSF009H09+                                                        AAGCCACCGGAACC
                      ____________________________________________________________
consensus             CCGAATGGGTCGAGGCCGAATAGAGTCGCCGGTTCCGGCTACTGGAAAGCCACCGGAACC
 
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JMFF047N23-           GACAAGATAATAACCACCCAAGGACGGAAAGTTGGGATCAAGAAAGCCCTTGTTTTTTAC
JMSF024K05-           GACAAGATAATAACCNCCCAAGGACGGAAAGTTGGGATCAAGAAAGCCCTTGTTTTTTAC
rJMSF009H09+          GACAAGATAATAACCACCCAAGGACGGAAAGTTGGGATCAAGAAAGCCCTTGTTTTTTAC
                      ____________________________________________________________
consensus             GACAAGATAATAACCACCCAAGGACGGAAAGTTGGGATCAAGAAAGCCCTTGTTTTTTAC
 
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JMFF047N23-           GTGGGTAAAGCACCCAAAGGAACAAAGACTAATTGGATTATGCATGAATATAGGCTTTCT
JMSF024K05-           GNGGGTAAAGCNCCCAAAGGAACAAAGACTAATTGGATTATGCATGAATATAGGCTTTCT
rJMSF009H09+          GTGGGTAAAGCACCCAAAGGAACAAAGACTAATTGGATTATGCATGAATATAGGCTTTCT
rJMFF040N04+                                            GGATTATGCATGAATATAGGCTTTCT
                      ____________________________________________________________
consensus             GTGGGTAAAGCACCCAAAGGAACAAAGACTAATTGGATTATGCATGAATATAGGCTTTCT
 
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JMFF047N23-           GAAGCACCCAGGAAAA-CCGGAAGTGCAAGGCTTGATGAATGGG                
JMSF024K05-           GAAGCACCCAGGAAAA-CCGGAAGTGCAAGGCTTGATGAATGGGTGCTATGTCGGA    
rJMSF009H09+          GAAGCACCCAGGAAAA-CCGGAAGTGCAAGGCTTGATGAATGGGTGCTATGTCGGATTTA
rJMFF040N04+          GAAGCACCCAGGAAAACCCGGAAGTGCAAGGCTTGATGAATGGGTGCTATGTCGGATTTA
rJMSF024K05+            AGCACCCAGGAAAA-CCGGAAGTGCAAGGCTTGATGAATGGGTGCTATGTCGGATTTA
                      ____________________________________________________________
consensus             GAAGCACCCAGGAAAA-CCGGAAGTGCAAGGCTTGATGAATGGGTGCTATGTCGGATTTA
 
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rJMSF009H09+          CAAGAAGAATTCTTCAAGTGCGGCGGCGGCGGCTCAGAAGCCGGTTTCTGGTGTTCAGAG
rJMFF040N04+          CAAGAAGAATTCTTCAAGTGCGGCGGCGGCGGCTCAGAAGCCGGTTTCTGGTGTTCAGAG
rJMSF024K05+          CAAGAAGAATTCTTCAAGTGCGGCGGCGGCGGCTCAGAAGCCGGTTTCTGGTGTTCAGAG
                      ____________________________________________________________
consensus             CAAGAAGAATTCTTCAAGTGCGGCGGCGGCGGCTCAGAAGCCGGTTTCTGGTGTTCAGAG
 
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rJMSF009H09+          CAAAGATTACAGCCACGGCTCCTCGTCGTCGTCTTCATCTCAGTTCGACGACATGCTGGA
rJMFF040N04+          CAAAGATTACAGCCACGGCTCCTCGTCGTCGTCTTCATCTCAGTTCGACGACATGCTGGA
rJMSF024K05+          CAAAGATTACAGCCACGGCTCCTCGTCGTCGTCTTCATCTCAGTTCGACGACATGCTGGA
                      ____________________________________________________________
consensus             CAAAGATTACAGCCACGGCTCCTCGTCGTCGTCTTCATCTCAGTTCGACGACATGCTGGA
 
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rJMSF009H09+          ATCTTTCCCGGAAATTAACGATCAATACTTTACCTTACCCAGAATCAACTCGTTAAAGAA
rJMFF040N04+          ATCTTTCCCGGAAATTAACGATCAATACTTTACCTTACCCAGAATCAACTCGTTAAAGAA
rJMSF024K05+          ATCTTTCCCGGAAATTAACGATCAATACTTTACCTTACCCAGAATCAACTCGTTAAAGAA
rJMFF047N23+                  CGGAAATTAACGATCAATACTTTACCTTACCCAGAATCAACTCGTTAAAGAA
                      ____________________________________________________________
consensus             ATCTTTCCCGGAAATTAACGATCAATACTTTACCTTACCCAGAATCAACTCGTTAAAGAA
 
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rJMSF009H09+          TCTTAATCTTCAACAAGACGACAAGTCAAGTATCCAACGTTTGAGCTCCGGGAGTTTTGA
rJMFF040N04+          TCTTAATCTTCAACAAGACGACAAGTCAAGTATCCAACGTTTGAGCTCCCGGAGTTTTGA
rJMSF024K05+          TCTTAATCTTCAACAAGACGACAAGTCAAGTATCCAACGTTTGAGCTCCGGGAGTTTTGA
rJMFF047N23+          TCTTAATCTTCAACAAGACGACAAGTCAAGTATCCAACGTTTGAGCTCCCGGAGTTTTGA
                      ____________________________________________________________
consensus             TCTTAATCTTCAACAAGACGACAAGTCAAGTATCCAACGTTTGAGCTCCGGGAGTTTTGA
 
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rJMSF009H09+          CTGGGCCACCTTAGCCTCCATACCTGAATTGGGGCCGGGTAATCAAATTCCCCAATCGGG
rJMFF040N04+          CTGGGCCACCTTAGCCTCCATACCTGAATTGGGGCCGGGTAATCAAATTCCCCAATCGGG
rJMSF024K05+          CTGGGCCACCTTAGCCTCCATACCTGAATTGGGGCCGGGTAATCAAATTCCCCAATCGGG
rJMFF047N23+          CTGGGCCACCTTAGCCTCCATACCTGAATTGGGGCCGGGTAATCAAATTCCCCAATCGGG
                      ____________________________________________________________
consensus             CTGGGCCACCTTAGCCTCCATACCTGAATTGGGGCCGGGTAATCAAATTCCCCAATCGGG
 
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rJMSF009H09+          TCATCTGAACCACGCCAACCCGGCCGATATTTATGGCCATTCAATGGCGGCATTGAGTTT
rJMFF040N04+          TCATCTGAACCACGCCAACCCGGCCGATATTTATGGCCATTCAATGGCGGCATTGAGTTT
rJMSF024K05+          TCATCTGAACCACGCCAACCCGGCCGATATTTATGGCCATTCAATGGCGGCATTGAGTTT
rJMFF047N23+          TCATCTGAACCACGCCAACCCGGCCGATATTTATGGCCATTCAATGGCGGCATTGAGTTT
                      ____________________________________________________________
consensus             TCATCTGAACCACGCCAACCCGGCCGATATTTATGGCCATTCAATGGCGGCATTGAGTTT
 
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rJMSF009H09+          TCCCGTAGACGATGAAGCGCAGAGCGGAATGAGGAGTAGTCAGCGGGTTGAGAATAATT 
rJMFF040N04+          TCCCGTAGACGATGAAGCGCAGAGCGGAATGAGGAGTAGTCAGCGGGTTGAGAATAATTC
rJMSF024K05+          TCCCGTAGACGATGAAGCGCAGAGCGGAATGAGGAGTAGTCAGCGGGTTGAGAATAATTC
rJMFF047N23+          TCCCGTAGACGATGAAGCGCAGAGCGGAATGAGGAGTAGTCAGCGGGTTGAGAATAATTC
                      ____________________________________________________________
consensus             TCCCGTAGACGATGAAGCGCAGAGCGGAATGAGGAGTAGTCAGCGGGTTGAGAATAATTC
 
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rJMFF040N04+          GGGTATCTACCAGCCGCAAAACCCGAACCCGTTCACACACAACTTCTCGAATTT      
rJMSF024K05+          GGGTATCTACCAGCCGCAAAACCCGAACCCGTTCACACACAACTTCTCGAATTTACTTGA
rJMFF047N23+          GGGTATCTACCAGCCGCAAAACCCGAACCCGTTCACACACAACTTCTCGAATTTACTTGA
                      ____________________________________________________________
consensus             GGGTATCTACCAGCCGCAAAACCCGAACCCGTTCACACACAACTTCTCGAATTTACTTGA
 
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rJMSF024K05+          CCCGTTTGGAATCCGATACCCCAACCAACCGGGTAGCTTAGCGTTCAGGCAGTAACAAAA
rJMFF047N23+          CCCGTTTGGAATCCGATACCCCAACCAACCGGGTAGCTTAGCGTTCAGGCAGTAACAAAA
                      ____________________________________________________________
consensus             CCCGTTTGGAATCCGATACCCCAACCAACCGGGTAGCTTAGCGTTCAGGCAGTAACAAAA
 
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rJMSF024K05+          TATTAGGGTTAAATTTAGAAATCCAGAAGATTCAGGGGCATGTGACTCCAATTTATTCTC
rJMFF047N23+          TATTAGGGTTAAATTTAGAAATCCAGAAGATTCAGGGGCATGTGACTCCAATTTATTCTC
                      ____________________________________________________________
consensus             TATTAGGGTTAAATTTAGAAATCCAGAAGATTCAGGGGCATGTGACTCCAATTTATTCTC
 
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rJMSF024K05+          TTCGCCTAAATATGTTTGTTCATTTCACTTACTTGCCCCGAAAGATTGTTCATTTCACTT
rJMFF047N23+          TTCGCCTAAATATGTTTGTTCATTTCACTTACTTGCCCCGAAAGATTGTTCATTTCACTT
                      ____________________________________________________________
consensus             TTCGCCTAAATATGTTTGTTCATTTCACTTACTTGCCCCGAAAGATTGTTCATTTCACTT
 
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rJMSF024K05+          ACTTGCCCCGAAAGATTGTTCATTTCACTTACT                           
rJMFF047N23+          ACTTGCCCCGAAAGATTGTTCATTTCACTTACTTGGAACTATTATTAGAGGAGAAACTTT
                      ____________________________________________________________
consensus             ACTTGCCCCGAAAGATTGTTCATTTCACTTACTTGGAACTATTATTAGAGGAGAAACTTT