Previous Contig 010400:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022F04Sequence503004808 (3)gb:CBL458993_16456706e-43Coleus blumei mRNA for tyrosine aminotransferase (tat gene).720010400 (2)gb:CBL458993_16456708e-59Coleus blumei mRNA for tyrosine aminotransferase (tat gene).
JMFF044C21Sequence632004808 (3)gb:CBL458993_16456702e-77Coleus blumei mRNA for tyrosine aminotransferase (tat gene).652010400 (2)gb:CBL458993_16456703e-33Coleus blumei mRNA for tyrosine aminotransferase (tat gene).

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022F04+ GCTAGTCATAAACGATCNTA
                      ____________________________________________________________
consensus GCTAGTCATAAACGATCNTA
 
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rJMFF022F04+ ACGGCACCATAAAAACCCCCAAGTTTGTTGAGCGCATTAAAAAGTACTGCGATATCTGTG
                      ____________________________________________________________
consensus ACGGCACCATAAAAACCCCCAAGTTTGTTGAGCGCATTAAAAAGTACTGCGATATCTGTG
 
. : . : . : . : . : . :
rJMFF022F04+ GAGGTCCTGCCACCTTTATCCAGGCAGCAGTCCCTCGTATTATTCAGCAAACCGAAGAGG
                      ____________________________________________________________
consensus GAGGTCCTGCCACCTTTATCCAGGCAGCAGTCCCTCGTATTATTCAGCAAACCGAAGAGG
 
. : . : . : . : . : . :
rJMFF022F04+ TTTTCTTTAGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
rJMFF044C21+ AGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
                      ____________________________________________________________
consensus TTTTCTTTAGGAAGACCATTAACATGTTGAAGGGGACTTCAGATATCTGTTGTGAAAAGA
 
. : . : . : . : . : . :
rJMFF022F04+ TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
rJMFF044C21+ TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
                      ____________________________________________________________
consensus TTAAGGAGATTCCATGTCTCACTTGCACACATAAACCACAAGGATCAATGGCTGTTATGG
 
. : . : . : . : . : . :
rJMFF022F04+ TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
rJMFF044C21+ TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
                      ____________________________________________________________
consensus TAAAGCTGAATCTGTCCTTGCTAAGAGACATCAGTGATGATATTGACTTCTGCTTCAAGC
 
. : . : . : . : . : . :
rJMFF022F04+ TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
rJMFF044C21+ TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
                      ____________________________________________________________
consensus TGGCCAAGGAGGAGTCTGTCATAATTCTTCCAGGATTGGCTGTGGGTCTCAAGAATTGGC
 
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rJMFF022F04+ TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
rJMFF044C21+ TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
                      ____________________________________________________________
consensus TGCGAATTACTTTTGCTGCAGAACCATCTTCCCTTGAAGAAGCACTGGGAAGGGTTAAGT
 
. : . : . : . : . : . :
rJMFF022F04+ CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
rJMFF044C21+ CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
                      ____________________________________________________________
consensus CTTTCTGTCAGAGGCATTCATATCAAGAAAATGGGCACTGCTAGTTGAAGCTAGAGTTGC
 
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rJMFF022F04+ GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
rJMFF044C21+ GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
                      ____________________________________________________________
consensus GTAGAGTTAGCTTTTTACAGAATATAGAAAATGGAGTTTGATACAAATATGCAAGTAGTA
 
. : . : . : . : . : . :
rJMFF022F04+ GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGTGCAATTACACCCACCTAATGGCCTT
rJMFF044C21+ GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGAGCAATTACACCCACCTAATGGCCTT
                      ____________________________________________________________
consensus GTGTCAATGTGTCAGTTCTCAAGAACTGATATTGTGCAATTACACCCACCTAATGGCCTT
 
. : . : . : . : . : . :
rJMFF022F04+ ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
rJMFF044C21+ ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
                      ____________________________________________________________
consensus ATACTCTTACTTTGAAGCATGAAGTAGTCAAACCATATGTTCTGCATTACCATAATATAT
 
. : . : . : . : . : . :
rJMFF022F04+ GTACTGATTATAC-TGGAAGTTGTGGT
rJMFF044C21+ GTACTGATTATACTTGGAAGTTGTGGTTGTAAAAGTTGAAATACATTCTTGCTTATAAAT
                      ____________________________________________________________
consensus GTACTGATTATACTTGGAAGTTGTGGTTGTAAAAGTTGAAATACATTCTTGCTTATAAAT
 
. : . : . : . : . : . :
rJMFF044C21+ GAAAGTTACTTGTATGTCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus GAAAGTTACTTGTATGTCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG