Previous Contig 010295:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C10Sequence507007048 (3)gb:AB196698_15296948e-30Daucus carota DcNLP gene for nucellin-like protein, complete cds.681010295 (3)gb:AB196698_15296944e-69Daucus carota DcNLP gene for nucellin-like protein, complete cds.
JMFF043E19Sequence641007048 (3)gb:AB196698_15296943e-52Daucus carota DcNLP gene for nucellin-like protein, complete cds.633010295 (3)gb:AB196698_15296945e-58Daucus carota DcNLP gene for nucellin-like protein, complete cds.
JMSF035M16Sequence645007048 (3)gb:AB196698_15296943e-52Daucus carota DcNLP gene for nucellin-like protein, complete cds.610010295 (3)gb:AK118764_18167262e-54Arabidopsis thaliana At4g33490 mRNA for putative nucellin, complete cds, clone:

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF003C10+ CTTAGGCGACGAGGTTTATG
                      ____________________________________________________________
consensus CTTAGGCGACGAGGTTTATG
 
. : . : . : . : . : . :
rJMFF003C10+ ATGCCTCGCGTGTCACCTGGACACCCCATGTCCACGAGACTACACGAAGCACTACTCTCC
                      ____________________________________________________________
consensus ATGCCTCGCGTGTCACCTGGACACCCCATGTCCACGAGACTACACGAAGCACTACTCTCC
 
. : . : . : . : . : . :
rJMFF003C10+ AGGGCCTGCAGAGCTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGATTGTAGT
rJMSF035M16+ GCAGAGNTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGANTGTAGT
rJMFF043E19+ GGAAAAGTACTGGGGTTAAGAATATGATNGTAGT
                      ____________________________________________________________
consensus AGGGCCTGCAGAGCTAACTTTTGGTGGGAAAAGTACTGGGGTTAAGAATATGATTGTAGT
 
. : . : . : . : . : . :
rJMFF003C10+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTTTTCTGTA
rJMSF035M16+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCNTATGAAGCTTTTCTGTA
rJMFF043E19+ GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTNTTCTGTA
                      ____________________________________________________________
consensus GTTTGATAGTGGAAGCTCTTACAGCTATATGAATTCCCAACCATATGAAGCTTTTCTGTA
 
. : . : . : . : . : . :
rJMFF003C10+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
rJMSF035M16+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCNTTGAGAGAAGCTGGGGANGACCCTACCCT
rJMFF043E19+ TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
                      ____________________________________________________________
consensus TTCAGTGGTGAAAGAACTGAGAGGAAAGCCATTGAGAGAAGCTGGGGATGACCCTACCCT
 
. : . : . : . : . : . :
rJMFF003C10+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
rJMSF035M16+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGNGATGTGAAGAAATACTT
rJMFF043E19+ ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
                      ____________________________________________________________
consensus ACCTTTCTGCTGGAAGGGCAGGAGGCCTTTCAGAAGCATCAGTGATGTGAAGAAATACTT
 
. : . : . : . : . : . :
rJMFF003C10+ CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
rJMSF035M16+ CAAGTCCTTTGCTNTCAGNTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
rJMFF043E19+ CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
                      ____________________________________________________________
consensus CAAGTCCTTTGCTCTCAGCTTCGCCAATGGATGGAGATCCAGAACTCTCTTCGAGATTTC
 
. : . : . : . : . : . :
rJMFF003C10+ CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
rJMSF035M16+ CCCAGAATCATATCTCATCATCTNTTNTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
rJMFF043E19+ CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
                      ____________________________________________________________
consensus CCCAGAATCATATCTCATCATCTCTTCTAAGGGCAGTGTCTGTCTGGGAGTTCTGAACGG
 
. : . : . : . : . : . :
rJMFF003C10+ AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
rJMSF035M16+ AACAGAAGCAGGACTGCATAANTNCAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
rJMFF043E19+ AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
                      ____________________________________________________________
consensus AACAGAAGCAGGACTGCATAACTACAACGTTATTGGAGATGTGTCGATGCAGGATAGAAT
 
. : . : . : . : . : . :
rJMFF003C10+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
rJMSF035M16+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
rJMFF043E19+ GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
                      ____________________________________________________________
consensus GGTGATTTACGACAATGAGAAGAACGCTATAGGTTGGACTCGCGCCAACTGCGATCGCCC
 
. : . : . : . : . : . :
rJMFF003C10+ TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
rJMSF035M16+ TCCGGCACCCAACGTTGTTTTCATTNGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
rJMFF043E19+ TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
                      ____________________________________________________________
consensus TCCGGCACCCAACGTTGTTTTCATTTGAACAAATTTAGGCTTCCATTATTCATTCTCTCA
 
. : . : . : . : . : . :
rJMFF003C10+ TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
rJMSF035M16+ TCTGTAGGCTATAACTTATNTATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
rJMFF043E19+ TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
                      ____________________________________________________________
consensus TCTGTAGGCTATAA-TTATATATAGCATTTATTATATCCTACAAACTGCCCTAGCTGCAT
 
. : . : . : . : . : . :
rJMFF003C10+ TA
rJMSF035M16+ TATATTCAAATGTAGTA
rJMFF043E19+ TATATTCAAATGTAGTATGTACACTACTTCAGTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TATATTCAAATGTAGTATGTACACTACTTCAGTAAAAAAAAAAAAAAAACTCTCCAGGGT