Previous Contig 009689:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031M23Sequence588001439 (2)gb:AF016713_17615122e-82Lycopersicon esculentum oligopeptide transporter (LeOPT1) mRNA, complete cds.772009689 (2)gb:AF016713_17615121e-57Lycopersicon esculentum oligopeptide transporter (LeOPT1) mRNA, complete cds.
JMFF039I08Sequence517001439 (2)gb:AF016713_17615129e-64Lycopersicon esculentum oligopeptide transporter (LeOPT1) mRNA, complete cds.694009689 (2)gb:AF016713_17615126e-48Lycopersicon esculentum oligopeptide transporter (LeOPT1) mRNA, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF031M23+ GTTCGTTCAACATCCCAGCAGCCTCGCTTTCTAGTTTCAACGTTATCAGCGT
                      ____________________________________________________________
consensus GTTCGTTCAACATCCCAGCAGCCTCGCTTTCTAGTTTCAACGTTATCAGCGT
 
. : . : . : . : . : . :
rJMFF039I08+ TACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCAGGGG
rJMFF031M23+ CCTAGTCTGTGTCCCAATCTACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCACGGG
                      ____________________________________________________________
consensus CCTAGTCTGTGTCCCAATCTACGACAGGGTCCTCGTCCCCGTGGCCAAGAAAATCAGGGG
 
. : . : . : . : . : . :
rJMFF039I08+ GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
rJMFF031M23+ GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
                      ____________________________________________________________
consensus GACCGAAAGGGGACTCTCTGAGCTGCAACGAATGGGGGTCGGGATTTGCATATCGACCTC
 
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rJMFF039I08+ GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
rJMFF031M23+ GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
                      ____________________________________________________________
consensus GTGTATGTTGGGGGCTGCATTGGTCGAGACGAGGCGACTAGAGCTTGCACGAGGCCTCGG
 
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rJMFF039I08+ GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
rJMFF031M23+ GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
                      ____________________________________________________________
consensus GCTGGTGCCAATGAGCATCATGTGGCAGGTGCCTCAGTATTTCTTGATGGGAGCTGCAGA
 
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rJMFF039I08+ GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
rJMFF031M23+ GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
                      ____________________________________________________________
consensus GGTGTTTACGTGCATCGGGCAGATGGAGTTCTTCTATGATCAATCGCCCGATTCGATGCG
 
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rJMFF039I08+ AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
rJMFF031M23+ AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
                      ____________________________________________________________
consensus AAGCTCGAGCACTGCCTTGGCACTGCTCACCACTTCCCTGGGAGCCTACTTGAGCTCATT
 
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rJMFF039I08+ TATGATCAGTGTTGTCTCATCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
rJMFF031M23+ TATGATCAGTGTTGTCTCGTCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
                      ____________________________________________________________
consensus TATGATCAGTGTTGTCTCGTCTGTTACTGGGTGGATTCCTGATAACTTGAACCAGGGACA
 
. : . : . : . : . : . :
rJMFF039I08+ CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
rJMFF031M23+ CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
                      ____________________________________________________________
consensus CCTTGATTATTACTTCTTGTTATTGGCTTTCATTGGCTTCTTAAACATGGTGGCTTACCT
 
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rJMFF039I08+ CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
rJMFF031M23+ CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
                      ____________________________________________________________
consensus CTTCTGTTCCAAGTTGTATGTATCAAAATCCAAACAGGTATCTTAGTGTTTACACCCCCT
 
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rJMFF039I08+ TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
rJMFF031M23+ TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
                      ____________________________________________________________
consensus TAGCTTGTGCTCTTATAATTCTTGTATCTAAATCAAACCAGTATGATACCCGTGCGATGC
 
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rJMFF039I08+ ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
rJMFF031M23+ ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
                      ____________________________________________________________
consensus ACGAGATGGATATTGTTCATCTTATTGTGTAATTGTGTGAAAAATTTAAGAGATGATGTA
 
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rJMFF039I08+ ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAG
rJMFF031M23+ ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAGGACAAAA
                      ____________________________________________________________
consensus ATATATAAAAAGTTGGAACGGAAACTTTAACATACAATATAGAAAAATAAGAGGACAAAA