Previous Contig 009225:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M21Sequence531000859 (2)442009225 (2)gb:ATAC021640_15437452e-21Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete sequenc
JMFF021L05Sequence517000859 (2)537009225 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016M21+ ATN
                      ____________________________________________________________
consensus ATN
 
. : . : . : . : . : . :
rJMFF016M21+ CCATNCNCTTNTCCGTGGGTNTTGCAAGCTTGAACAGTTTGACGAGGCTNTTGGATTNTT
                      ____________________________________________________________
consensus CCATNCNCTTNTCCGTGGGTNTTGCAAGCTTGAACAGTTTGACGAGGCTNTTGGATTNTT
 
. : . : . : . : . : . :
rJMFF016M21+ GAGAGAGATGAAGGAGCNTGGTGTTCAACCCNGTGCGGATGAATATAATAAGNTGATCCN
                      ____________________________________________________________
consensus GAGAGAGATGAAGGAGCNTGGTGTTCAACCCNGTGCGGATGAATATAATAAGNTGATCCN
 
. : . : . : . : . : . :
rJMFF016M21+ ATNTNTTTGCCTAAACGCTTTGGATTGGGAAAAGGCTGAGAAGCTNCTGGAGGAGATGAA
rJMFF021L05+ TTTGCCTAAACGCTTTGGATTGGGAAAAGGNTGAGAAGCTNCTGGAGGAGATGAA
                      ____________________________________________________________
consensus ATNTNTTTGCCTAAACGCTTTGGATTGGGAAAAGGCTGAGAAGCTNCTGGAGGAGATGAA
 
. : . : . : . : . : . :
rJMFF016M21+ GGGGAATGGGGTGCATTTCAATGCAATTNCAAAAGGTTTTATAAGAGCNGTTAAGGAGAT
rJMFF021L05+ GGGGAATGGGGNGCATTTCAANGCAATTACAAAAGGTTTTATAAGAGCNGTTAAGGAGAT
                      ____________________________________________________________
consensus GGGGAATGGGGTGCATTTCAATGCAATTACAAAAGGTTTTATAAGAGCNGTTAAGGAGAT
 
. : . : . : . : . : . :
rJMFF016M21+ GGAGCNGGATGAATTNGAAAGGAAAGAAATGACAGTTGATGCATAAATTTTACAAGATAA
rJMFF021L05+ GGAGCNGGATGAATTNGAAAGGAAAGAAATGNCNGTTGATGCATAAATTTTNCAAGATAA
                      ____________________________________________________________
consensus GGAGCNGGATGAATTNGAAAGGAAAGAAATGACAGTTGATGCATAAATTTTACAAGATAA
 
. : . : . : . : . : . :
rJMFF016M21+ CTGTGTCGTGTGGTAGTCAGTTNTTGTAGCNTTTACTATTTTGACGATAATTGCAGGNGA
rJMFF021L05+ CTGTGTNGNGTGGTAGTCANTTTTTGTAGCNTTTNCTATTTTGACGATAATTGCAGGNGA
                      ____________________________________________________________
consensus CTGTGTCGTGTGGTAGTCAGTTTTTGTAGCNTTTACTATTTTGACGATAATTGCAGGNGA
 
. : . : . : . : . : . :
rJMFF016M21+ GTTTTTAGATTNTTTGTTTTTTTTTTTCCCCCTTGATTACGTTTTCTCTTTGCAGAACGT
rJMFF021L05+ GTTTTTAGATTNTTTGTTTTTTTTTTTCCCCCTTGATTACGTTTTCTCTTTGCAGAACGT
                      ____________________________________________________________
consensus GTTTTTAGATTNTTTGTTTTTTTTTTTCCCCCTTGATTACGTTTTCTCTTTGCAGAACGT
 
. : . : . : . : . : . :
rJMFF016M21+ TCAAAGCTTAGAAGAAGTA
rJMFF021L05+ TCAAAGCTTAGAAGAAGTATGTTTTGTCTTTCGCCTATGGTTGGTTATTGGTGTTCTTCA
                      ____________________________________________________________
consensus TCAAAGCTTAGAAGAAGTATGTTTTGTCTTTCGCCTATGGTTGGTTATTGGTGTTCTTCA
 
. : . : . : . : . : . :
rJMFF021L05+ TTTGCCATTGCTAGCTCTAAAATAATAAAAACAGTTCTCCTTAGTGGGAAGGGGTAAAAA
                      ____________________________________________________________
consensus TTTGCCATTGCTAGCTCTAAAATAATAAAAACAGTTCTCCTTAGTGGGAAGGGGTAAAAA
 
. : . : . : . : . : . :
rJMFF021L05+ TAATGATCATTTGCACCGACCATGCTGTTCTTATATTGCTTGAACCTCTGTACATACACA
                      ____________________________________________________________
consensus TAATGATCATTTGCACCGACCATGCTGTTCTTATATTGCTTGAACCTCTGTACATACACA
 
. : . : . : . : . : . :
rJMFF021L05+ ACACTGTCTTGTTTTTTTCCCTTTTAATTTGTATCTATTATATCCTTATTTTAAAGGAAA
                      ____________________________________________________________
consensus ACACTGTCTTGTTTTTTTCCCTTTTAATTTGTATCTATTATATCCTTATTTTAAAGGAAA