Previous Contig 009187:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047L11+                                                      TTTCTGAAGCACCCTA
rJMFF020O20+                                                      TTTCTGAAGCACCCTA
                      ____________________________________________________________
consensus                                                         TTTCTGAAGCACCCTA
 
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rJMSF047L11+          TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
rJMFF035O03+                 TCAACTACAGCAATAGAAACTGCAAAACGTATTTNTAATGTTAACTCTAAAGA
rJMFF020O20+          TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
                      ____________________________________________________________
consensus             TTTGATCTCAACTACAGCAATAGAAACTGCAAAACGTATTTCTAATGTTAACTCTAAAGA
 
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rJMSF047L11+          GGATAGGCTGGATGCAGAAAAGGATAGAAGTAGAAGGTCTCATGAAAGATCTAGTCATCG
rJMFF035O03+          GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
rJMFF020O20+          GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
                      ____________________________________________________________
consensus             GGATAGGCTGGATGCAGAAAAGGATAGAAGCAGAAGGTCTCATGAAAGATCTAGTCATCG
 
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rJMSF047L11+          GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
rJMFF035O03+          GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
rJMFF020O20+          GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
                      ____________________________________________________________
consensus             GGAACGTGAAAGGCATGATGAAGAGAGCCGAAAGGAAAATGTTGACCATGACCGAGCTCG
 
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rJMSF047L11+          GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
rJMFF035O03+          GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
rJMFF020O20+          GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
                      ____________________________________________________________
consensus             GGAACATAGGCCTGAAAAAACGCGGACTCCAGATAATCAGAAGCTTTTAGATGCAAAACA
 
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rJMSF047L11+          ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
rJMFF035O03+          ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
rJMFF020O20+          ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
                      ____________________________________________________________
consensus             ACTGATCGATATGATTCCAAAGACTAAAAATGAGTTGTTTTCGTACGAGATAAATTGGGC
 
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rJMSF047L11+          TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
rJMFF035O03+          TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
rJMFF020O20+          TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
                      ____________________________________________________________
consensus             TATCTATGACAAGAATGAACTGCATGAGAGAATGAGGCCATGGATTGCTAAGAAGATTAC
 
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rJMSF047L11+          AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
rJMFF035O03+          AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
rJMFF020O20+          AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
                      ____________________________________________________________
consensus             AGAATTTCTGGGAGAGGAGGAACCCACATTGGTAGACTATATAGTCTCCAGCACTCAAGA
 
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rJMSF047L11+          ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
rJMFF035O03+          ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
rJMFF020O20+          ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
                      ____________________________________________________________
consensus             ACACGTGAAGGCGGCTGAGATGCTGGAGAGACTGCAAGCAATATTAGATGAAGAAGCCGA
 
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rJMSF047L11+          AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
rJMFF035O03+          AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
rJMFF020O20+          AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
                      ____________________________________________________________
consensus             AATGTTTGTTTTGAAGATGTGGAGGATGCTCATCTTTGAAGTCAAGAAAGTTGAAACTGG
 
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rJMSF047L11+          TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
rJMFF035O03+          TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
rJMFF020O20+          TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
                      ____________________________________________________________
consensus             TTTGGCTTCCAGGTCTAAGTCTTAATTTTGTTTCCTGTTTATTTTCATATCATGTTTGTT
 
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rJMSF047L11+          GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTNGACTCC
rJMFF035O03+          GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
rJMFF020O20+          GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
                      ____________________________________________________________
consensus             GTCTTGGAGCCATATCTCTGTGTACTAGTATTTTCCTTTCTTTTTTGCCCCCTTGACTCC
 
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rJMSF047L11+          TGGAAAATCACATTGCTACAGGACCTAAATGATGGANAACACAATAA             
rJMFF035O03+          TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATT 
rJMFF020O20+          TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATTT
                      ____________________________________________________________
consensus             TGGAAAATCACATTGCTACAGGACCTAAATGATGGAAAACACAATAATACTTGCTCATTT