Previous Contig 008513:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007M05Sequence571000395 (4)pir|T49082|T490825e-31hypothetical protein F4F15.140 - Arabidopsis thaliana>gb:ATF4F15_1550669 Arabido734008513 (2)pir|T49082|T490821e-38hypothetical protein F4F15.140 - Arabidopsis thaliana>gb:ATF4F15_1550669 Arabido
JMSF006G08Sequence390000395 (4)pir|T49082|T490826e-09hypothetical protein F4F15.140 - Arabidopsis thaliana>gb:ATF4F15_1550669 Arabido430008513 (2)pir|T49082|T490825e-09hypothetical protein F4F15.140 - Arabidopsis thaliana>gb:ATF4F15_1550669 Arabido

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF007M05+ GGTCAGCAAGTATC
                      ____________________________________________________________
consensus GGTCAGCAAGTATC
 
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rJMFF007M05+ TTTACGGGGATCTACTTATGCTTCAGTCGGAATCAAGACCTTGTGTTTCAATCCTGGCTC
                      ____________________________________________________________
consensus TTTACGGGGATCTACTTATGCTTCAGTCGGAATCAAGACCTTGTGTTTCAATCCTGGCTC
 
. : . : . : . : . : . :
rJMFF007M05+ CAATTATTTGTTCGCTGGATCCACCGCTGGACATGCATGTTGTTGGGACCTTAGGAAGCA
                      ____________________________________________________________
consensus CAATTATTTGTTCGCTGGATCCACCGCTGGACATGCATGTTGTTGGGACCTTAGGAAGCA
 
. : . : . : . : . : . :
rJMFF007M05+ AGACAGGACCCTCTGGGAAGAACGAGTGAGTCCCAACGTTCTTTACTCCATGCATCATCT
                      ____________________________________________________________
consensus AGACAGGACCCTCTGGGAAGAACGAGTGAGTCCCAACGTTCTTTACTCCATGCATCATCT
 
. : . : . : . : . : . :
rJMSF006G08+ GGA
rJMFF007M05+ CCGAAATGACAAATCAACATTAGTCATCGGTGGGATAGATGGCGTCTTGAGAGTGGTGGA
                      ____________________________________________________________
consensus CCGAAATGACAAATCAACATTAGTCATCGGTGGGATAGATGGCGTCTTGAGAGTGGTGGA
 
. : . : . : . : . : . :
rJMSF006G08+ CCAGGATAGCGGTGAAGTGATCGCGACACATATCATGGAAGAAAGCAGCAGCAGCAGCAG
rJMFF007M05+ CCAGGATAGCGGTGAAGTGATCGCGACACATATCATGGAAGAAAGCAGCAGCAGCAGCAG
                      ____________________________________________________________
consensus CCAGGATAGCGGTGAAGTGATCGCGACACATATCATGGAAGAAAGCAGCAGCAGCAGCAG
 
. : . : . : . : . : . :
rJMSF006G08+ CAGCAGTGCATCTCGCCCGTCTGACCGAAATGTAACTGTGAGGAAAGTGAAAAAGCTTTC
rJMFF007M05+ CAGCAGTGCATCTCGCCCGTCTGACCGAAATGTAACTGTGAGGAAAGTGAAAAAGCTTTC
                      ____________________________________________________________
consensus CAGCAGTGCATCTCGCCCGTCTGACCGAAATGTAACTGTGAGGAAAGTGAAAAAGCTTTC
 
. : . : . : . : . : . :
rJMSF006G08+ CTCAAGTGATGATCGCATTGATCTGATGTCTAAAGCTTGTCGACCAAGAATCACTTGCTT
rJMFF007M05+ CTCAAGTGATGATCGCATTGATCTGATGTCTAAAGCTTGTCGACCAAGAATCACTTGCTT
                      ____________________________________________________________
consensus CTCAAGTGATGATCGCATTGATCTGATGTCTAAAGCTTGTCGACCAAGAATCACTTGCTT
 
. : . : . : . : . : . :
rJMSF006G08+ GGCTGTTGGAATGAGGAAGGTTGTGACTACACATAATGATAATTGTATCAGGGTTTGGAA
rJMFF007M05+ GGCTGTTGGAATGAGGAAGGTTGTGACTACACATAATGATAATTGTATCAGGGTTTGGAA
                      ____________________________________________________________
consensus GGCTGTTGGAATGAGGAAGGTTGTGACTACACATAATGATAATTGTATCAGGGTTTGGAA
 
. : . : . : . : . : . :
rJMSF006G08+ ATTTGAGTAGTTATGTTTTCAACAATATATTCTTTGGTATCATATTCTCCTATATTTAGT
rJMFF007M05+ ATTTGAGTAGTTATGTTTTCAACAATATATTCTTTGGTATCATATTCTCCTATATTTAGT
                      ____________________________________________________________
consensus ATTTGAGTAGTTATGTTTTCAACAATATATTCTTTGGTATCATATTCTCCTATATTTAGT
 
. : . : . : . : . : . :
rJMSF006G08+ TGTTGCATAAGGTTTGCTAATGAACTTGTGGTCTAGTGGCACAAAGTGACTCTCCCATAT
rJMFF007M05+ TGTTGCATAAGGTTTGCTAATGAACTTGTGGTCTAGTGGCACAAAGTGACTCTCCCATAT
                      ____________________________________________________________
consensus TGTTGCATAAGGTTTGCTAATGAACTTGTGGTCTAGTGGCACAAAGTGACTCTCCCATAT
 
. : . : . : . : . : . :
rJMSF006G08+ GGGAAGTTATGGGTTCAAGTCACAAAGTTAGCAGTACTAGGAAAAAGTTGTTGCATAGGG
rJMFF007M05+ GGGAAGTTATGGGTTCAAGTCACAAAGTTAGCAGTACTAGGAAAAAGTTGTTGCATAGGG
                      ____________________________________________________________
consensus GGGAAGTTATGGGTTCAAGTCACAAAGTTAGCAGTACTAGGAAAAAGTTGTTGCATAGGG
 
. : . : . : . : . : . :
rJMSF006G08+ TTTCGAT
rJMFF007M05+ TTTCGATTATTGTGAAAGTCAATTTGATATTAAACACTATTCTTGAATTTACCATATTAA
                      ____________________________________________________________
consensus TTTCGATTATTGTGAAAGTCAATTTGATATTAAACACTATTCTTGAATTTACCATATTAA