| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006P09 | Sequence | 533 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 8e-50 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 703 | 008471 (8) | gb:AF253404_493043 | 0.002 | Streptococcus pneumoniae strain 60 PspA (pspA) gene, partial cds. |
| JMFF011B24 | Sequence | 525 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 2e-49 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 684 | 008471 (8) | gb:AF253404_493043 | 0.002 | Streptococcus pneumoniae strain 60 PspA (pspA) gene, partial cds. |
| JMFF014B05 | Sequence | 524 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 2e-49 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 474 | 008471 (8) | |||
| JMFF014O03 | Sequence | 687 | 008471 (8) | gb:AF253404_493043 | 0.003 | Streptococcus pneumoniae strain 60 PspA (pspA) gene, partial cds. | |||||
| JMFF019I06 | Sequence | 525 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 2e-49 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 616 | 008471 (8) | gb:AF071816_476233 | 0.040 | Streptococcus pneumoniae strain EF3296 PspA (pspA) gene, partial cds. |
| JMFF029K03 | Sequence | 525 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 3e-43 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 661 | 008471 (8) | gb:AF253404_493043 | 0.001 | Streptococcus pneumoniae strain 60 PspA (pspA) gene, partial cds. |
| JMFF034L06 | Sequence | 521 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 9e-49 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 666 | 008471 (8) | gb:AF253404_493043 | 0.012 | Streptococcus pneumoniae strain 60 PspA (pspA) gene, partial cds. |
| JMFF037A24 | Sequence | 627 | 000355 (9) | sp|Q9LKA5|UMP1_ARATH | 2e-68 | Unknown mitochondrial protein At3g15000.>gb:BT015868_1642486 Arabidopsis thalian | 650 | 008471 (8) | gb:AF071816_476233 | 0.045 | Streptococcus pneumoniae strain EF3296 PspA (pspA) gene, partial cds. |
This contig is upended
. : . : . : . : . : . :
rJMFF011B24+ GGCCCAAACCAGGGCAANTATG
rJMFF014O03+ GGCCCAANCCAGGGCAANTATG
rJMFF034L06+ CCAAACCAGGGCAACTATG
rJMFF029K03+ GGCCCAAACCAGGGCAACTATG
rJMFF006P09+ GCCAAANTATCAACNTGCTCCAGGCCCAAACCAGGGCAACTATG
____________________________________________________________
consensus GCCAAANTATCAACNTGCTCCAGGCCCAAACCAGGGCAACTATG
. : . : . : . : . : . :
rJMFF011B24+ CGCNGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF014O03+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF034L06+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF037A24+ CCAAACCAGGGAAACTTNGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF029K03+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF019I06+ CGGGACCAAACCAGGGCAACAACAATCCGA
rJMFF006P09+ CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
____________________________________________________________
consensus CGCCGGGCCCAAACCAGGGAAACTTTGCTCCGGGACCAAACCAGGGCAACAACAATCCGA
. : . : . : . : . : . :
rJMFF011B24+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF014O03+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTNTGCTTCATGGCCAAACCAGAACAGCT
rJMFF034L06+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTNTGCTTCATGGCCAAACCAGAACAGCT
rJMFF037A24+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF029K03+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF019I06+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
rJMFF006P09+ GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
____________________________________________________________
consensus GCAACTATGGTCCAGGACCCAACCAGAGCAACTCTGCTTCATGGCCAAACCAGAACAGCT
. : . : . : . : . : . :
rJMFF011B24+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF014O03+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF034L06+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF037A24+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF029K03+ CTGCCCCAGTCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF019I06+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
rJMFF006P09+ CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
____________________________________________________________
consensus CTGCCCCAGGCCCAAACCAGAACAACTATGCACCAGGGCAGAACCAGAACTACCCTCCTC
. : . : . : . : . : . :
rJMFF011B24+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF014O03+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF034L06+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF037A24+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF029K03+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF019I06+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF014B05+ CCAANCCAGCNCAATTNCCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
rJMFF006P09+ CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
____________________________________________________________
consensus CGCCTGGGCCAAACCAGCACAATTACCCTCCTCCTCCAGGGCCGAATCAGCACAACTACC
. : . : . : . : . : . :
rJMFF011B24+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF014O03+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF034L06+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF037A24+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF029K03+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGG------CCAAACT
rJMFF019I06+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF014B05+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
rJMFF006P09+ CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
____________________________________________________________
consensus CTCCTCCAGGTCCTAACCAACACATGTCTGCTAACTATGCTCCAGGGCCAAACCCAAACT
. : . : . : . : . : . :
rJMFF011B24+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF014O03+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF034L06+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF037A24+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF029K03+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF019I06+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF014B05+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
rJMFF006P09+ ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
____________________________________________________________
consensus ACTATTCTCAAGGGCCTAATCAGAACAATTATGCTCCAAACATGGATGGCAGAAACCCTT
. : . : . : . : . : . :
rJMFF011B24+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF014O03+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF034L06+ CCCAGAATCAGAACATCCCCCCTNCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF037A24+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF029K03+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF019I06+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF014B05+ CCCAGAATCAGAACATCCCCCCTTCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
rJMFF006P09+ CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
____________________________________________________________
consensus CCCAGAATCAGAACATCCCCCC-TCCTAACTATCATCAGTAGGAACTGTGCAAAGAATGT
. : . : . : . : . : . :
rJMFF011B24+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF014O03+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF034L06+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF037A24+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF029K03+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF019I06+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF014B05+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
rJMFF006P09+ AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
____________________________________________________________
consensus AGCTCCGGACTTCCAAAAGTTTAGGATTTTTTTGTTGAAAGGTACTATCATGAATGTTGT
. : . : . : . : . : . :
rJMFF011B24+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF014O03+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF034L06+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF037A24+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF029K03+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF019I06+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF014B05+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
rJMFF006P09+ TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
____________________________________________________________
consensus TTGGTTTCATGATCTCATGTTAAGACTTGTTCTACAGTGAAAAATTCTGTAGTTATAATG
. : . : . : . : . : . :
rJMFF011B24+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF014O03+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF034L06+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF037A24+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF029K03+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF019I06+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF014B05+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
rJMFF006P09+ GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
____________________________________________________________
consensus GATGTGATGTCTGTATAATTGCGTTGGTGTGTATGGCAAATGATAGCCATGGCATGGACC
. : . : . : . : . : . :
rJMFF011B24+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF014O03+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF034L06+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCG
rJMFF037A24+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF029K03+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGC
rJMFF019I06+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCG
rJMFF014B05+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGT
rJMFF006P09+ TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGTT
____________________________________________________________
consensus TGTCACCAGGGAAACAATGTTGCAATGGTAGCAGCAATAGTAATGCGCTGTCTCAGCGTT