Previous Contig 008385:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005I02Sequence446000570 (5)gb:AF191497_17754831e-38Nicotiana tabacum DnaJ-like protein mRNA, complete cds.469008385 (6)gb:AY088840_15738491e-14Arabidopsis thaliana clone 96785 mRNA, complete sequence.
JMFF006N05Sequence528000570 (5)pir|T04618|T046181e-47heat shock protein homolog F20O9.160 - Arabidopsis thaliana>gb:ATCHRIV68_1546728808008385 (6)gb:AY088840_15738492e-74Arabidopsis thaliana clone 96785 mRNA, complete sequence.
JMFF010O03Sequence573000570 (5)pir|T04618|T046188e-47heat shock protein homolog F20O9.160 - Arabidopsis thaliana>gb:ATCHRIV68_1546728770008385 (6)gb:AY088840_15738493e-77Arabidopsis thaliana clone 96785 mRNA, complete sequence.
JMFF027C21Sequence531000570 (5)pir|T04618|T046181e-47heat shock protein homolog F20O9.160 - Arabidopsis thaliana>gb:ATCHRIV68_1546728756008385 (6)gb:AY088840_15738492e-74Arabidopsis thaliana clone 96785 mRNA, complete sequence.
JMFF039C23Sequence430008385 (6)pir|T48161|T481617e-10heat shock protein 40-like - Arabidopsis thaliana>gb:ATT10O8_1554286 Arabidopsis
JMSF017O01Sequence395000570 (5)pir|T04618|T046183e-36heat shock protein homolog F20O9.160 - Arabidopsis thaliana>gb:ATCHRIV68_1546728500008385 (6)pir|T48161|T481613e-19heat shock protein 40-like - Arabidopsis thaliana>gb:ATT10O8_1554286 Arabidopsis

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF006N05+ GATGA
                      ____________________________________________________________
consensus GATGA
 
. : . : . : . : . : . :
rJMFF006N05+ TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCTAAGAAA
rJMFF027C21+ TGTGCCAAGAAA
rJMFF010O03+ GAATGCCGGCGGCAATGTGCCAAGAAA
                      ____________________________________________________________
consensus TATGTTTGCTCAATTTAGGAATGTCGCAGGTGAGAATGCCGGCGGCAATGTGCCAAGAAA
 
. : . : . : . : . : . :
rJMFF006N05+ GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF027C21+ GGCACNTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
rJMFF010O03+ GGCACCTGCCATNGAGCGGACACTT-CCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
                      ____________________________________________________________
consensus GGCACCTGCCATTGAGCGGACACTTCCCCTGTAGTTTAGAAGATCTGTACAAGGGAACCA
 
. : . : . : . : . : . :
rJMFF006N05+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF027C21+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
rJMFF010O03+ CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
                      ____________________________________________________________
consensus CCAAGAAGATGAAGATTTCCCGAGAAGTTATTGACACCACTGGGAGACCCACCACAATGG
 
. : . : . : . : . : . :
rJMFF006N05+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF027C21+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
rJMFF010O03+ AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
                      ____________________________________________________________
consensus AGGAAATTCTGAGTATTGAGATCAAGCCTGGTTGGAAGAAGGGAACTAAAATAACCTTTC
 
. : . : . : . : . : . :
rJMFF006N05+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF027C21+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
rJMFF010O03+ CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
                      ____________________________________________________________
consensus CAGAAAAAGGGAATGAACAGCGCGGGATTATACCCTCAGACCTTGTCTTCATTATTGATG
 
. : . : . : . : . : . :
rJMFF006N05+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF027C21+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMFF010O03+ AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
rJMSF017O01+ CCCAAAAGCTTT
                      ____________________________________________________________
consensus AAAAGCCACACAGCGTCTTCAAGAGGGATGGCAACGATCTCATTGTCACCCAAAAGCTTT
 
. : . : . : . : . : . :
rJMFF006N05+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMFF027C21+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAGCAACCCTCGATGGCCGAAATC
rJMFF010O03+ CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
rJMSF017O01+ CATTTNTNGNGGCTTTGNCTGGCTATNCTGCNCAAGTAACAACCCTCGATGGCCGAAATN
                      ____________________________________________________________
consensus CATTGCTCGAGGCTTTGACTGGCTATACTGCACAAGTAACAACCCTCGATGGCCGAAATC
 
. : . : . : . : . : . :
rJMFF006N05+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF027C21+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMFF010O03+ TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
rJMSF017O01+ TCNCTATNCCCNTCNCTTCAATCATAAGTCCNACATNCGAAGNAGTTGTTAAAGGNGAGG
rJMFF039C23+ CTTCAATCATAAGTNCAACATNCGAAGAAGTTGTTAAAGGTGAGG
rJMFF005I02+ CTTCAATCATAAGTCCAACATNCGAAGAAGTTGTTAAAGGNGAGG
                      ____________________________________________________________
consensus TCACTATACCCATCACTTCAATCATAAGTCCAACATACGAAGAAGTTGTTAAAGGTGAGG
 
. : . : . : . : . : . :
rJMFF006N05+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF027C21+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMFF010O03+ GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
rJMSF017O01+ GGNTGCCTATCCCGNAGGAGCCCNGCAAAAGGGGGAACCTNCGNATAAAGTTCAACNTTA
rJMFF039C23+ GGANGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGNACCTCCGAATAAANTTNAACATTA
rJMFF005I02+ GGATGCCTATNCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTNAACATTA
                      ____________________________________________________________
consensus GGATGCCTATCCCGAAGGAGCCCAGCAAAAGGGGGAACCTCCGAATAAAGTTCAACATTA
 
. : . : . : . : . : . :
rJMFF006N05+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF027C21+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMFF010O03+ AGTTCCCCAGCAAGCTTACATCTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
rJMSF017O01+ AGTTNCCCNGCAAGNTTACATTTGAGCAGAAAGCCGGGNTTNAGAAACNGTTAACCTGNT
rJMFF039C23+ AGTTNCCCAGCAAGNTTNCATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
rJMFF005I02+ AGTTCCCCAGCAAGNTTACATTTGAGCAGAAANCCGGGATTAAGAAACAGTTAACATGAT
                      ____________________________________________________________
consensus AGTTCCCCAGCAAGCTTACATTTGAGCAGAAAGCCGGGATTAAGAAACAGTTAACATGAT
 
. : . : . : . : . : . :
rJMFF006N05+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF027C21+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMFF010O03+ GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
rJMSF017O01+ GNGAAGNTCAATGCTNGGCAACNGAGAGAGCCTTNTATTTATTAAAAGCTCGCGNCNGAT
rJMFF039C23+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
rJMFF005I02+ GAGAAGATCAATGNTAGGCAACAGAGAGAGCNTTTTATTTATTAAAAGCTCGNGACAGAT
                      ____________________________________________________________
consensus GAGAAGATCAATGCTAGGCAACAGAGAGAGCATTCTATTTATTAAAAGCTCGCGACAGAT
 
. : . : . : . : . : . :
rJMFF006N05+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF027C21+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMFF010O03+ TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
rJMSF017O01+ TTCNCTCATNTTCTTGCTTGGTNTTTCCCNGCAAAGTAAATTTTAATTCNAGAGNTGCTG
rJMFF039C23+ TTCACTCATTTTTTTGNTTGGTNTTTCCCTGCAAANTAAATTTTAATTCAAGAGTTGNTG
rJMFF005I02+ TTCNCTCATTTTNTTGNTTGGTNTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGNTG
                      ____________________________________________________________
consensus TTCACTCATCTTCTTGCTTGGTCTTTCCCTGCAAAGTAAATTTTAATTCAAGAGTTGCTG
 
. : . : . : . : . : . :
rJMFF006N05+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF027C21+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMFF010O03+ AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
rJMSF017O01+ AATTTGNGNATTTGTGNGATTTGTNTGGTAGTAGGNGTATCNTAATTTTTATGNTAATTT
rJMFF039C23+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAANTT
rJMFF005I02+ AANTTGNGTATTTGTGAGANTTGTTTGGTAGTAGGAGTATCATAATTTTTATGGTAATTT
                      ____________________________________________________________
consensus AATTTGTGTATTTGTGAGATTTGTCTGGTAGTAGGAGTATCATAATTTTTATGCTAATTT
 
. : . : . : . : . : . :
rJMFF006N05+ GCCTACGAAATTATAGAGCAACA
rJMFF027C21+ GCCTACGAAATTATAGAGCAACAT
rJMFF010O03+ GCCTACGAAATTATAGAGCAACAT
rJMSF017O01+ GCCTACGAAATTATAGNGCAACATCCNTGATTGNTGCCAAAA
rJMFF039C23+ GCCTNCGAAATTATAGAGCAACATCCNTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
rJMFF005I02+ GCCTNCGAAATTATAGAGCAACATCCTTGATTGNTGCCAAAANCTTCCCNGNGCTNTTGT
                      ____________________________________________________________
consensus GCCTACGAAATTATAGAGCAACATCCTTGATTGCTGCCAAAANCTTCCCNGNGCTNTTGT
 
. : . : . : . : . : . :
rJMFF039C23+ TTTTATACT
rJMFF005I02+ TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA
                      ____________________________________________________________
consensus TTTTATACTNTTANTTGNAACNGNGAATTGCCNTTAAAAAAAAAAAATCTATAAGGAAAA