Previous Contig 008318:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004E10Sequence549007016 (2)gb:AY738711_16261062e-68Digitalis ferruginea progesterone 5-beta-reductase gene, complete cds.748008318 (2)gb:AY574950_16158802e-73Digitalis lanata progesterone 5-beta-reductase mRNA, complete cds.>gb:AY585867_1
JMSF035F10Sequence658007016 (2)gb:AY585865_16163266e-81Digitalis grandiflora progesterone 5-beta-reductase gene, complete cds.700008318 (2)gb:AY574950_16158807e-66Digitalis lanata progesterone 5-beta-reductase mRNA, complete cds.>gb:AY585867_1

Alignment

This contig is upended


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rJMFF004E10+ CCGTACAGCATGATGAACGCCGTCGGAA
                      ____________________________________________________________
consensus CCGTACAGCATGATGAACGCCGTCGGAA
 
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rJMFF004E10+ CTCTCTGCGTCTACGCCGCTATCTGTAAGCACGAGGGAATCCCTCTGAGATTCTCCGGGC
                      ____________________________________________________________
consensus CTCTCTGCGTCTACGCCGCTATCTGTAAGCACGAGGGAATCCCTCTGAGATTCTCCGGGC
 
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rJMSF035F10+ ATTGCTCCGATGCGGATTTGATTGCAGAGCAAG
rJMFF004E10+ TAAAAGCTGCTTGGGATGGATACGCGAATTGCTCCGATGCGGATTTGATTGCAGAGCAAG
                      ____________________________________________________________
consensus TAAAAGCTGCTTGGGATGGATACGCGAATTGCTCCGATGCGGATTTGATTGCAGAGCAAG
 
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rJMSF035F10+ AAATCTGGGCAGCGGTGGACCCATCCGCCAAGAATGAAGCTTTCAACGTCAGCAATGGAG
rJMFF004E10+ AAATCTGGGCAGCGGTGGACCCATCCGCCAAGAATGAAGCTTTCAACGTCAGCAATGGAG
                      ____________________________________________________________
consensus AAATCTGGGCAGCGGTGGACCCATCCGCCAAGAATGAAGCTTTCAACGTCAGCAATGGAG
 
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rJMSF035F10+ ATGTGTTCAAATGGAAGCATTTCTGTAAAGTTTTAGCAGATAAGTTTGAGGTGGGAGTTG
rJMFF004E10+ ATGTGTTCAAATGGAAGCATTTCTGTAAAGTTTTAGCAGATAAGTTTGAGGTGGGAGTTG
                      ____________________________________________________________
consensus ATGTGTTCAAATGGAAGCATTTCTGTAAAGTTTTAGCAGATAAGTTTGAGGTGGGAGTTG
 
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rJMSF035F10+ TGGAATTTGAGGAGAGAAGTGAGAGCAATAATCTGGAGGTGATGATGAAGGAGAAAGGGC
rJMFF004E10+ TGGAATTTGAGGAGAGAAGTGAGAGCAATAATCTGGAGGTGATGATGAAGGAGAAAGGGC
                      ____________________________________________________________
consensus TGGAATTTGAGGAGAGAAGTGAGAGCAATAATCTGGAGGTGATGATGAAGGAGAAAGGGC
 
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rJMSF035F10+ CTGTTTGGGACGAGATTGTGAGGGAAAACGGGTTGTTGTCTACGAAATTGGAGGATGTTG
rJMFF004E10+ CTGTTTGGGACGAGATTGTGAGGGAAAACGGGTTGTTGTCTACGAAATTGGAGGATGTTG
                      ____________________________________________________________
consensus CTGTTTGGGACGAGATTGTGAGGGAAAACGGGTTGTTGTCTACGAAATTGGAGGATGTTG
 
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rJMSF035F10+ GTCACTGGTGGTTTGTGGATCTTCTGTTTAGTGTGGAATCTCCCCTGGATAATATGAACA
rJMFF004E10+ GTCACTGGTGGTTTGTGGATCTTCTGTTTAGTGTGGAATCTCCCCTGGATAATATGAACA
                      ____________________________________________________________
consensus GTCACTGGTGGTTTGTGGATCTTCTGTTTAGTGTGGAATCTCCCCTGGATAATATGAACA
 
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rJMSF035F10+ AGAGCAAAGAACATGGCTTCCTGGGATTTAGGAACTCCGAGAAAGCCTTCATTTCATGGA
rJMFF004E10+ AGAGCAAAGAACATGGCTTCCTGGGATTTAGGAACTCCGAGAAAGCCTTCATTTCATGGA
                      ____________________________________________________________
consensus AGAGCAAAGAACATGGCTTCCTGGGATTTAGGAACTCCGAGAAAGCCTTCATTTCATGGA
 
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rJMSF035F10+ TTGATAAGATGAAAGCTTACAAGATTGTTCCTTAACTAAACTAGTTAATTAGTTTGGCAA
rJMFF004E10+ TTGATAAGATGAAAGCTTACAAGATTGTTCCTTAACTAAACTAGTTAATTAGTTTGGCAA
                      ____________________________________________________________
consensus TTGATAAGATGAAAGCTTACAAGATTGTTCCTTAACTAAACTAGTTAATTAGTTTGGCAA
 
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rJMSF035F10+ AAAACTCGTGTTCAAGCGATATAACTGTGGCTCTTTCAAATGGAAGTCACAAGTTCAAAC
rJMFF004E10+ AAAACTCGTGTTCAAGCGATATAACTGTGGCTCTTTCAAACGGAAGTCACAAGTTCAAAC
                      ____________________________________________________________
consensus AAAACTCGTGTTCAAGCGATATAACTGTGGCTCTTTCAAATGGAAGTCACAAGTTCAAAC
 
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rJMSF035F10+ TTCAATGGGGTATTGACTATTTGTGCTTCAATACAAATAATTAAAACAAAAATAGTTAGT
rJMFF004E10+ TTCAATGGGGTATTGACTATTTGTGCTTCAATACAAATAATTAAAACAAAAATAGTTAGT
                      ____________________________________________________________
consensus TTCAATGGGGTATTGACTATTTGTGCTTCAATACAAATAATTAAAACAAAAATAGTTAGT
 
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rJMSF035F10+ TTGGACTTTCTTGTGTTTGTTTGCATGCGTGCATTGTCATATTTGTGTAA
rJMFF004E10+ TTGGACTTTCTTGTGTTTGTTTGCATGCGTGCATTGTCATATTTGTGTAATGAATAAACA
                      ____________________________________________________________
consensus TTGGACTTTCTTGTGTTTGTTTGCATGCGTGCATTGTCATATTTGTGTAATGAATAAACA