Previous Contig 008176:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F01Sequence274000012 (2)gb:AY351702_16016925e-14Ipomoea trifida glycosyltransferase 10 mRNA, complete cds.140008176 (2)
JMFF023M15Sequence535000012 (2)gb:AY351702_16016923e-66Ipomoea trifida glycosyltransferase 10 mRNA, complete cds.446008176 (2)gb:AY351700_16016904e-16Ipomoea trifida glycosyltransferase 1 mRNA, complete cds.>gb:AY448010S1_1606573

Alignment

This contig is upended


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rJMFF023M15+ TCCTTCCCCCNCNCCAAGGCCCCCATNATCG
                      ____________________________________________________________
consensus TCCTTCCCCCNCNCCAAGGCCCCCATNATCG
 
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rJMFF023M15+ GTTTNNTTGAATTCAAGGGAGCCAANGAATGGGTNGTCCCTGAAAAACTNGGNGNCGCCA
                      ____________________________________________________________
consensus GTTTNNTTGAATTCAAGGGAGCCAANGAATGGGTNGTCCCTGAAAAACTNGGNGNCGCCA
 
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rJMFF023M15+ TNAACAACAACAACAACAACAAAAACAAACCCAACGCCGCCAAACCTGNGCCAAAGAAGA
                      ____________________________________________________________
consensus TNAACAACAACAACAACAACAAAAACAAACCCAACGCCGCCAAACCTGNGCCAAAGAAGA
 
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rJMFF023M15+ AGTTTNTNTTNAGNGACAGGATTTTNCCTCAGGAGTTGGGATTTGCANTTTTTTTGNTTT
                      ____________________________________________________________
consensus AGTTTNTNTTNAGNGACAGGATTTTNCCTCAGGAGTTGGGATTTGCANTTTTTTTGNTTT
 
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rJMFF023M15+ TNTGNGGAGGGTANGACTTTTTGTATGGGAAGAACCNTTACTANANATACCTTTTCCTCC
                      ____________________________________________________________
consensus TNTGNGGAGGGTANGACTTTTTGTATGGGAAGAACCNTTACTANANATACCTTTTCCTCC
 
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rJMFF023M15+ AANTCANAACCTTTACGATTGCAGGAGNGGGNTNCCTNGGCNCTATTGTCCCGTTTTAAN
rJMFF001F01+ CTATTGTCCCGTTTTAAN
                      ____________________________________________________________
consensus AANTCANAACCTTTACGATTGCAGGAGNGGGNTNCCTNGGCNCTATTGTCCCGTTTTAAN
 
. : . : . : . : . : . :
rJMFF023M15+ TGGTTACGTTTTTTTTTTTTTAGTACGTAGAAGATTTAATTTAATTTAATGGGAAGTTGG
rJMFF001F01+ TGGTTACGTTTTTTTTTTTTTAGTACGTAGAAGATTTAATTTAATTTAATGGGAAGTTGG
                      ____________________________________________________________
consensus TGGTTACGTTTTTTTTTTTTTAGTACGTAGAAGATTTAATTTAATTTAATGGGAAGTTGG
 
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rJMFF023M15+ AGCAGGACCATTCAGAAGTGTACATATATATTTAGGAAGACGGACAAGAAGAATC
rJMFF001F01+ AGCAGGACCATTCAGAAGTGTACATATATATTTAGGAAGACGGACAAGAAGAATCAGGTT
                      ____________________________________________________________
consensus AGCAGGACCATTCAGAAGTGTACATATATATTTAGGAAGACGGACAAGAAGAATCAGGTT