Previous Contig 007886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039H02Sequence522007886 (7)gb:AY054666_15633203e-36Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D763010517 (8)gb:AY054666_15633207e-46Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D
JMFF045E17Sequence628007886 (7)gb:AY054666_15633205e-50Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D582010517 (8)gb:AY056242_15635632e-26Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10
JMSF002O12Sequence245007886 (7)760010517 (8)gb:AY056242_15635634e-56Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10
JMSF017J01Sequence436007886 (7)gb:AY054666_15633201e-16Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D754010517 (8)gb:AY056242_15635632e-52Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10
JMSF032K14Sequence666007886 (7)gb:AY054666_15633203e-57Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D616010517 (8)gb:AY054666_15633202e-43Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D
JMSF046E03Sequence664007886 (7)gb:AY054666_15633205e-54Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D642010517 (8)gb:AY054666_15633204e-47Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D
JMSF049A20Sequence702007886 (7)gb:AY054666_15633202e-54Arabidopsis thaliana endomembrane protein EMP70 precusor isolog (At1g10950; T19D775010517 (8)gb:AY056242_15635636e-40Arabidopsis thaliana putative endomembrane protein EMP70 precusor isolog (At1g10

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF045E17+ GAATGATCTGATCTTNATTATATTT
JMSF032K14+ TAAAGGTTTTGGGCTCTCTTGACTGAGATTGACATGAATGATCTGATCTTTATTATATTT
JMSF046E03+ ACTGAGATTGACATGAATGATCTGATCTTTATTATATTT
JMSF049A20+ ACTGAGATTGACATGAATGATCTGATCTTTATTATATTT
                      ____________________________________________________________
consensus TAAAGGTTTTGGGCTCTCTTGACTGAGATTGACATGAATGATCTGATCTTTATTATATTT
 
. : . : . : . : . : . :
JMFF045E17+ AACTGTTATACTNTTATGGGTGAAAATAACAGGTTTGTTATCACTATTCCTGTCCAGGTC
JMSF032K14+ AACTGTTATACTTTTATGGGTGAAAATAACAGGTTTGTTATCACTATTCCTGTCCAGGTC
JMSF046E03+ AACTGTTATACTTTTATGGGTGAAAATAACAGGTTTGTTATCACTATTCCTGTCCAGGTC
JMSF049A20+ AACTGTTATACTTTTATGGGTGAAAATAACAGGTTTGTTATCACTATTCCTGTCCAGGTC
                      ____________________________________________________________
consensus AACTGTTATACTTTTATGGGTGAAAATAACAGGTTTGTTATCACTATTCCTGTCCAGGTC
 
. : . : . : . : . : . :
JMFF045E17+ CCCAACAAAACCCCATAAAGGCAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
JMFF039H02+ CAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
JMSF032K14+ CCCAACAAAACCCCATAAAGGCAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
JMSF046E03+ CCCAACAAAACCCCATAAAGGCAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
JMSF049A20+ CCCAACAAAACCCCATAAAGGCAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
                      ____________________________________________________________
consensus CCCAACAAAACCCCATAAAGGCAAATCATCCATGAAGAATTCAAACCAATAACTGTTTTC
 
. : . : . : . : . : . :
JMFF045E17+ AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
JMFF039H02+ AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
JMSF032K14+ AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
JMSF046E03+ AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
JMSF049A20+ AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
                      ____________________________________________________________
consensus AATAGCATCCTTGAATTTCCTGACCTTCGTCTCATCTAGTTCAAGTTGACAAATATGGCC
 
. : . : . : . : . : . :
JMFF045E17+ CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
JMFF039H02+ CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
JMSF032K14+ CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
JMSF046E03+ CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
JMSF017J01+ TTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
JMSF049A20+ CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
                      ____________________________________________________________
consensus CTTGTCCACATTTTTTTGAAACTTTATGTTGATCTGGCTATCTATAAGTTCATTTCCACC
 
. : . : . : . : . : . :
JMFF045E17+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
JMFF039H02+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
JMSF032K14+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
JMSF046E03+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
JMSF017J01+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
JMSF049A20+ TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
                      ____________________________________________________________
consensus TAAAACTTCACCAAGGCCACCCCATCTGTGAGGAGCATTTTCAGATGCACGACAAAATGG
 
. : . : . : . : . : . :
JMFF045E17+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
JMFF039H02+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
JMSF032K14+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
JMSF046E03+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
JMSF017J01+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
JMSF049A20+ AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
                      ____________________________________________________________
consensus AAGGCTGTAATAGTTGTAGGTCTCTTGTGGGTTATAGTAAGGTCCAACTTTATTTACCCA
 
. : . : . : . : . : . :
JMFF045E17+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
JMFF039H02+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
JMSF032K14+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
JMSF046E03+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
JMSF002O12+ TGATCGGACTCGGAAGCCAACACTGGCGA
JMSF017J01+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
JMSF049A20+ AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
                      ____________________________________________________________
consensus AAGGGTAACAGGGTCATCAGGCTTATACTTGTGATCGGACTCGGAAGCCAACACTGGCGA
 
. : . : . : . : . : . :
JMFF045E17+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMFF039H02+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMSF032K14+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMSF046E03+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMSF002O12+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMSF017J01+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
JMSF049A20+ GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
                      ____________________________________________________________
consensus GACGACGAGGACGGCGGCGAGGAAAGAGAGTATTCCGACGGCGTGCAACATCACTGTCGC
 
. : . : . : . : . : . :
JMFF045E17+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMFF039H02+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMSF032K14+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMSF046E03+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMSF002O12+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMSF017J01+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
JMSF049A20+ CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
                      ____________________________________________________________
consensus CGTACTTCCGATGGCCTGGATCTAAGTTCGCAAGAGATGTAGATCGCGAAGAGCAGATGA
 
. : . : . : . : . : . :
JMFF045E17+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMFF039H02+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMSF032K14+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMSF046E03+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMSF002O12+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMSF017J01+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
JMSF049A20+ GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
                      ____________________________________________________________
consensus GGTATATATGAGGATGAAGACCCGATTTGCCTTTGCTCGGTGGATCACGACACGATAAAG
 
. : . : . : . : . : . :
JMFF045E17+ ACT
JMFF039H02+ ACT
JMSF032K14+ ACTAC
JMSF046E03+ ACTACAGAGATCCGTACTTCCGGC
JMSF002O12+ ACTACAGAGATCCGTACTTCCGGCAAAACGAAG
JMSF017J01+ ACTACAGAGATCCGTACTTCCGGCAAAACGAAG
JMSF049A20+ ACTACAGAGATCCGTACTTCCGGCAAAACGAAGTTCATAAATGCTCTGTGCTTTTTTCCA
                      ____________________________________________________________
consensus ACTACAGAGATCCGTACTTCCGGCAAAACGAAGTTCATAAATGCTCTGTGCTTTTTTCCA