clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF031P10 | Sequence | 626 | 007655 (2) | gb:AC005499_1532771 | 2e-14 | Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete sequence.>gb:A | 741 | 012806 (2) | |||
JMSF045D10 | Sequence | 698 | 007655 (2) | gb:AC005499_1532771 | 2e-14 | Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete sequence.>gb:A | 743 | 012806 (2) | gb:AC005499_1532771 | 5e-22 | Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete sequence.>gb:A |
This contig is upended
. : . : . : . : . : . :
JMSF031P10+ TTTTCAGCAGCAGCACCCTTACT
JMSF045D10+ TCAGTATCCTTCACTTTTTCAGCAGCAGCACCCTTACT
____________________________________________________________
consensus TCAGTATCCTTCACTTTTTCAGCAGCAGCACCCTTACT
. : . : . : . : . : . :
JMSF031P10+ GTGAACCTTGTTGCTATTTTCTTTAGGGTGTTCTTTAGGCATAGCAACTGGCAGCGGAGG
JMSF045D10+ GTGAACCTTGTTGCTATTTTCTTTAGGGTGTTCTTTAGGCATAGCAACTGGCAGCGGAGG
____________________________________________________________
consensus GTGAACCTTGTTGCTATTTTCTTTAGGGTGTTCTTTAGGCATAGCAACTGGCAGCGGAGG
. : . : . : . : . : . :
JMSF031P10+ ACCAATAGTAGTCTTGTTCTCAGCTTCCTTTATAATGTTCTTCTGAAAATCCTTTGGAAA
JMSF045D10+ ACCAATAGTAGTCTTGTTCTCAGCTTCCTTTATAATGTTCTTCTGAAAATCCTTTGGAAA
____________________________________________________________
consensus ACCAATAGTAGTCTTGTTCTCAGCTTCCTTTATAATGTTCTTCTGAAAATCCTTTGGAAA
. : . : . : . : . : . :
JMSF031P10+ AGTAGGTTCCAATCTTCTTATAACATCATCTATATGACTTGATTGCTCACCCTTCGATTT
JMSF045D10+ AGTAGGTTCCAATCTTCTTATAACATCATCTATATGACTTGATTGCTCACCCTTCGATTT
____________________________________________________________
consensus AGTAGGTTCCAATCTTCTTATAACATCATCTATATGACTTGATTGCTCACCCTTCGATTT
. : . : . : . : . : . :
JMSF031P10+ GTTTCTAGATATAGTAGCTTCAGGTTGATCATAAACATGAACCATTTTAGTGAATGAAGT
JMSF045D10+ GTTTCTAGATATAGTAGCTTCAGGTTGATCATAAACATGAACCATTTTAGTGAATGAAGT
____________________________________________________________
consensus GTTTCTAGATATAGTAGCTTCAGGTTGATCATAAACATGAACCATTTTAGTGAATGAAGT
. : . : . : . : . : . :
JMSF031P10+ TTGTTTTTCAGTAACATATCCGGGTGAAGGATGGAAGCCATTGTGTAGGCCGAGCAAAAA
JMSF045D10+ TTGTTTTTCAGTAACATATCCGGGTGAAGGATGGAAGCCATTGTGTAGGCCGAGCAAAAA
____________________________________________________________
consensus TTGTTTTTCAGTAACATATCCGGGTGAAGGATGGAAGCCATTGTGTAGGCCGAGCAAAAA
. : . : . : . : . : . :
JMSF031P10+ GATAAGAGGCACGAGCATGGAAAGAAACACGAGACAGAGAACAGCAATCACCAGGAAATT
JMSF045D10+ GATAAGAGGCACGAGCATGGAAAGAAACACGAGACAGAGAACAGCAATCACCAGGAAATT
____________________________________________________________
consensus GATAAGAGGCACGAGCATGGAAAGAAACACGAGACAGAGAACAGCAATCACCAGGAAATT
. : . : . : . : . : . :
JMSF031P10+ CCACCGCCTCTTCCCCGGCGGAATAGCGTAAGGCGGTCCACCGCCCTTCATCTCCTCCTC
JMSF045D10+ CCACCGCCTCTTCCCCGGCGGAATAGCGTAAGGCGGTCCACCGCCCTTCATCTCCTCCTC
____________________________________________________________
consensus CCACCGCCTCTTCCCCGGCGGAATAGCGTAAGGCGGTCCACCGCCCTTCATCTCCTCCTC
. : . : . : . : . : . :
JMSF031P10+ CTCCTGGCACTCGCTCCCAGCGCCTTATCACTGTCCCCTAATGACCTTTAATATCTCCTT
JMSF045D10+ CTCCTGGCACTCGCTCCCAGCGCCTTATCACTGTCCCCTAATGACCTTTAATATCTCCTT
____________________________________________________________
consensus CTCCTGGCACTCGCTCCCAGCGCCTTATCACTGTCCCCTAATGACCTTTAATATCTCCTT
. : . : . : . : . : . :
JMSF031P10+ CACGGCCAAATCTAACAGGCATTGAAGGATCACGTCACCTGGAATCCAGCCGGAAAGTTG
JMSF045D10+ CACGGCCAAATCTAACAGGCATTGAAGGATCACGTCACCTGGAATCCAGCCGGAAAGTTG
____________________________________________________________
consensus CACGGCCAAATCTAACAGGCATTGAAGGATCACGTCACCTGGAATCCAGCCGGAAAGTTG
. : . : . : . : . : . :
JMSF031P10+ CCCTCTATGAACTGATGTGGATTTAGCACTAGGCGGTGTCGCCGTCGAGTGGAATCAAAC
JMSF045D10+ CCCTCTATGAACTGATGTGGATTTAGCACTAGGCGGTGTCGCCGTCGAGTGGAATCAAAC
____________________________________________________________
consensus CCCTCTATGAACTGATGTGGATTTAGCACTAGGCGGTGTCGCCGTCGAGTGGAATCAAAC
. : . : . : . : . : . :
JMSF031P10+ AC
JMSF045D10+ ACGGAATGTTGTAATACGCCAACTGGGAGATTAGCGAGAGGAGGGAACCGTGATGCCATC
____________________________________________________________
consensus ACGGAATGTTGTAATACGCCAACTGGGAGATTAGCGAGAGGAGGGAACCGTGATGCCATC