Previous Contig 007276:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039E24-                                                                    GG
                      ____________________________________________________________
consensus                                                                       GG
 
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rJMSF039E24-          CATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCATCA
                      ____________________________________________________________
consensus             CATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCATCA
 
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rJMSF039E24-          TTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTCTT
                      ____________________________________________________________
consensus             TTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTCTT
 
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rJMSF039E24-          CAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGATGA
                      ____________________________________________________________
consensus             CAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGATGA
 
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rJMSF039E24-          CATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGATAA
                      ____________________________________________________________
consensus             CATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGATAA
 
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JMFN038M04+                            ACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATAGA
rJMSF039E24-          GGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATAGA
                      ____________________________________________________________
consensus             GGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATAGA
 
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JMFN038M04+           TCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAGCA
JMFS116H06+                              CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAGCA
rJMSF039E24-          TCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAGCA
JMSF039E24+                              CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAGCA
                      ____________________________________________________________
consensus             TCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAGCA
 
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JMFN038M04+           CCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGCCG
JMFS116H06+           CCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGCCG
rJMSF039E24-          CCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGCCG
JMSF039E24+           CCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGCCG
                      ____________________________________________________________
consensus             CCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGCCG
 
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JMFN038M04+           CCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTCTA
JMFS116H06+           CCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTCTA
rJMSF039E24-          CCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTCTA
JMSF039E24+           CCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTCTA
                      ____________________________________________________________
consensus             CCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTCTA
 
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JMFN038M04+           GGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCACCG
JMFS116H06+           GGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCACCG
rJMSF039E24-          GGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCACCG
JMSF039E24+           GGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCACCG
                      ____________________________________________________________
consensus             GGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCACCG
 
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JMFN038M04+           TGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGGGC
JMFS116H06+           TGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGGGC
rJMSF039E24-          TGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGGGC
JMSF039E24+           TGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGGGC
                      ____________________________________________________________
consensus             TGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGGGC
 
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JMFN038M04+           ATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGTAG
JMFS116H06+           ATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGTAG
rJMSF039E24-          ATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGTAG
JMSF039E24+           ATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGTAG
                      ____________________________________________________________
consensus             ATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGTAG
 
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JMFN038M04+           TTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGACA
JMFS116H06+           TTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGACA
rJMSF039E24-          TTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGACA
JMSF039E24+           TTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGACA
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consensus             TTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGACA
 
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JMFN038M04+           AGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTCCG
JMFS116H06+           AGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTCCG
rJMSF039E24-          AGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTCCG
JMSF039E24+           AGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTCCG
                      ____________________________________________________________
consensus             AGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTCCG
 
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JMFN038M04+           GATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGTAC
JMFS116H06+           GATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGTAC
rJMSF039E24-          GATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCCGGGACTCCTCGTCGCCTTTGTAC
JMSF039E24+           GATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGTAC
                      ____________________________________________________________
consensus             GATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGTAC
 
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JMFN038M04+           GCATAGTTCCACATCTCTCCGATC-AAACCAATGTCT                       
JMFS116H06+           GCATAGTTCCACATCTCTCCGATC-AAACCAATGTCT                       
rJMSF039E24-          GCATAGTTCCACATCTCTCCGATCAAAACCAATGTCTTCCCTCAATATTCCG        
JMSF039E24+           GCATAGTTCCACATCTCTCCGATC-AAACCAATGTCTT-CCTCAATATTCCGATTACTTG
                      ____________________________________________________________
consensus             GCATAGTTCCACATCTCTCCGATC-AAACCAATGTCTTCCCTCAATATTCCGATTACTTG
 
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JMSF039E24+           ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC
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consensus             ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC