Previous Contig 007177:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF007P13+                                        TTTTTTTTTTCTTTTTTGAATATGCAATCCC
                      ____________________________________________________________
consensus                                          TTTTTTTTTTCTTTTTTGAATATGCAATCCC
 
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JMFF007P13+           AACTTTTTTTTTTGATAATACAATCCCAACTTTCTAATCACTCCATTGAAGACCAAACCT
rJMSF001N11-                                ATCCCAACTTTCTAATCACTCCATTGAAGACCAAACCT
                      ____________________________________________________________
consensus             AACTTTTTTTTTTGATAATACAATCCCAACTTTCTAATCACTCCATTGAAGACCAAACCT
 
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JMFF007P13+           CGACACATATAATCATACTATGATACTAAA                              
rJMSF001N11-          CGACACATATAATCATACTATGATACTAAACCCCAAAACTTGTTCCAAACAACCTAATTC
rJMSF037N09-                                                                   TTC
                      ____________________________________________________________
consensus             CGACACATATAATCATACTATGATACTAAACCCCAAAACTTGTTCCAAACAACCTAATTC
 
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rJMSF001N11-          TTTTATACACACTTTGTTTTAGACCGACCAGTAAAATCGCAATCACAAACTATTTGGGAG
rJMSF037N09-          TTTTATACNCNCTTTGTTTTANACCGACCAGTAAANTCNCANTCACAAACTATTTGGGAG
JMSF037N09+                                                                 TGGGAG
                      ____________________________________________________________
consensus             TTTTATACACACTTTGTTTTAGACCGACCAGTAAAATCGCAATCACAAACTATTTGGGAG
 
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rJMSF001N11-          TGNGCACGGGATATACNCGCTTGTTTTGATGCGATTAANGATGGATTTCATCATCTGATC
rJMSF037N09-          NGTGCACGGGATATACACGCTNGTTTTGATGCGATTAANGATGGATTTCATCATCTGATC
JMSF037N09+           TGTGCACGGGATATACACGCTTGTTTTGATGCGATTAATGATGGATTTCATCATCTGATC
                      ____________________________________________________________
consensus             TGTGCACGGGATATACACGCTTGTTTTGATGCGATTAATGATGGATTTCATCATCTGATC
 
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rJMSF001N11-          TGATTATTCTGATCCTACTTGAAATGGATGGNGGGAGTTTACATAATANAGCANACGGAG
rJMSF037N09-          TGATTATTCTGATCCTACTTGAAANGGATGGTGGGAGTTTACATAATAGAGCANACGGAG
JMSF037N09+           TGATTATTCTGATCCTACTTGAAATGGATGGTGGGAGTTTACATAATAGAGCAGACGGAG
                      ____________________________________________________________
consensus             TGATTATTCTGATCCTACTTGAAATGGATGGTGGGAGTTTACATAATAGAGCAGACGGAG
 
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rJMSF001N11-          GGTTGGTAATCATGAACTGGGCAAGCGTAGTAAGGGGGGTAAGGAAAGNGAGAAGGATCC
rJMSF037N09-          GGTTGGTAATCATGAACTGGGCAAGCGTAGTAAGGGGGGTAAGGAAAGTGAGAAGGATCC
JMSF037N09+           GGTTGGTAATCATGAACTGGGCAAGCGTAGTAAGGGGGGTAAGGAAAGTGAGAAGGATCC
                      ____________________________________________________________
consensus             GGTTGGTAATCATGAACTGGGCAAGCGTAGTAAGGGGGGTAAGGAAAGTGAGAAGGATCC
 
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rJMSF001N11-          NGGAANACTGTAACGACTTTTGGNGGTTGGGCCTCGTCTTTCTTCTTATCCTCCTTCTTC
rJMSF037N09-          NGGAANACTGTAACGACTTTTGGNGGTTGGGCCTCGTCTTTCTTCTTATCCTCCTTCTTC
JMSF037N09+           TGGAAGACTGTAACGACTTTTGGTGGTTGGGCCTCGTCTTTCTTCTTATCCTCCTTCTTC
                      ____________________________________________________________
consensus             TGGAAGACTGTAACGACTTTTGGTGGTTGGGCCTCGTCTTTCTTCTTATCCTCCTTCTTC
 
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rJMSF001N11-          NCCTCCTTTTTCTCTTCCTTTTTCTCGGCCGAACCCACGCTCACTAGCTCCGCTTGCCCC
rJMSF037N09-          TCCTCCTTTTTCTCTTCCTTTTTCTCGGCCGAACCCACGCTCACTAGCTCCGCTTGCCCC
JMSF037N09+           TCCTCCTTTTTCTCTTCCTTTTTCTCGGCCGAACCCACGCTCACTAGCTCCGCTTGCCCC
                      ____________________________________________________________
consensus             TCCTCCTTTTTCTCTTCCTTTTTCTCGGCCGAACCCACGCTCACTAGCTCCGCTTGCCCC
 
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rJMSF001N11-          ACCCTCTTCCTCAGCAGGTTCGCCANAACCACCGAGTCGAACTCGCCCACCACCTCTAAC
rJMSF037N09-          ACCCTCTTCCTCAGCAGGTTCGCCAGAACCACCGAGTCGAACTCGCCCACCACCTCTAAN
JMSF037N09+           ACCCTCTTCCTCAGCAGGTTCGCCAGAACCACCGAGTCGAACTCGCCCACCACCTCTAAC
                      ____________________________________________________________
consensus             ACCCTCTTCCTCAGCAGGTTCGCCAGAACCACCGAGTCGAACTCGCCCACCACCTCTAAC
 
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rJMSF001N11-          TGCCCCTTCTCCGCTTGCATAGCCGCCGATTCAACCCC                      
rJMSF037N09-          NGCCCCTTCTCCGCTTGCATANCCGCCGATTCAACCCCTGCAGGAAACCACAAAACTTGC
JMSF037N09+           TGCCCCTTCTCCGCTTGCATAGCCGCCGATTCAACCCCTGCAGGAAACCACAAAACTTGC
                      ____________________________________________________________
consensus             TGCCCCTTCTCCGCTTGCATAGCCGCCGATTCAACCCCTGCAGGAAACCACAAAACTTGC
 
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rJMSF037N09-          CGGTAAAGACCAGTACTTGGNGAAAAATGTGATGACGGTCTATAAAGAAATAAAGTTATG
JMSF037N09+           CGGTAAAGACCAGTACTTGGTGAAAAATGTGATGACGGTCTATAAAGAAATAAAGTTATG
                      ____________________________________________________________
consensus             CGGTAAAGACCAGTACTTGGTGAAAAATGTGATGACGGTCTATAAAGAAATAAAGTTATG
 
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rJMSF037N09-          CGTACCAGGCAGGCTGACGGCAATCTTGAAGGCCTTGGTACGAGCCTTCTGGTCCTTGAT
JMSF037N09+           CGTACCAGGCAGGCTGACGGCAATCTTGAAGGCCTTGGTACGAGCCTTCTGGTCCTTGAT
                      ____________________________________________________________
consensus             CGTACCAGGCAGGCTGACGGCAATCTTGAAGGCCTTGGTACGAGCCTTCTGGTCCTTGAT
 
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rJMSF037N09-          TGA                                                         
JMSF037N09+           TGAGATACCGATCACTACCTTTTGCTTCCCCATTCTTTCTGCAGGCAGGGTAGAGAGATA
                      ____________________________________________________________
consensus             TGAGATACCGATCACTACCTTTTGCTTCCCCATTCTTTCTGCAGGCAGGGTAGAGAGATA
 
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JMSF037N09+           AAGCGGCGAAGAATAGAGAATTTAGAGAGAGAAAGAAGTATGGATGGAGCTACTACTCTC
                      ____________________________________________________________
consensus             AAGCGGCGAAGAATAGAGAATTTAGAGAGAGAAAGAAGTATGGATGGAGCTACTACTCTC