Previous Contig 007114:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005M22Sequence289007114 (2)279013061 (2)gb:AC134932_17419654e-06Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complet
JMSF036N01Sequence636007114 (2)681013061 (2)gb:ATAC018907_15437035e-61Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence, complete sequenc

Alignment

This contig is upended


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JMSF036N01+ AATTCTTGATCCTGAAGGCTCATCTNGGGGGGGCAA
                      ____________________________________________________________
consensus AATTCTTGATCCTGAAGGCTCATCTNGGGGGGGCAA
 
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JMSF036N01+ TTGCAAATTGGAATACCCAAAATCTTTAAATTNTGGCCTAAATTCTTTAGAACTACCATT
                      ____________________________________________________________
consensus TTGCAAATTGGAATACCCAAAATCTTTAAATTNTGGCCTAAATTCTTTAGAACTACCATT
 
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JMSF036N01+ GAATTTCAGAATAACAAAATCTTTTGGGGCATTGATGACACTCAAATTGACACTATGAAT
                      ____________________________________________________________
consensus GAATTTCAGAATAACAAAATCTTTTGGGGCATTGATGACACTCAAATTGACACTATGAAT
 
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JMSF036N01+ GCCCCATAGAATCAAGATTACCAGACAAGCCCCCAGCACCACCAGCTTAAACCACCAATG
                      ____________________________________________________________
consensus GCCCCATAGAATCAAGATTACCAGACAAGCCCCCAGCACCACCAGCTTAAACCACCAATG
 
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JMSF036N01+ AACCCTGGGGTTTGCCCTAAAGCTTCCACCTTTCTCAGACATCTGTGAACTTTTGATCTT
                      ____________________________________________________________
consensus AACCCTGGGGTTTGCCCTAAAGCTTCCACCTTTCTCAGACATCTGTGAACTTTTGATCTT
 
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JMSF005M22+ AAAACAGAAAACTTG
JMSF036N01+ GAAACCACAATCTATACATACATACTCTACATATCACCCAAGATCAAAACAGAAAACTTG
                      ____________________________________________________________
consensus GAAACCACAATCTATACATACATACTCTACATATCACCCAAGATCAAAACAGAAAACTTG
 
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JMSF005M22+ AAAATCCCAGAATCCCACATCCAAACAAGATTCAAGGAAAAACAATTTCTGCCCTTCAAA
JMSF036N01+ AAAATCCCAGAATCCCACATCCAAACAAGATTCAAGGAAAAACAATTTCTGCCCTTCAAA
                      ____________________________________________________________
consensus AAAATCCCAGAATCCCACATCCAAACAAGATTCAAGGAAAAACAATTTCTGCCCTTCAAA
 
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JMSF005M22+ GAAATATAACCCCCCCGGATCTCCAGGCTACCTGGTTGGAGGGCAAACCCCCAAAAGCTA
JMSF036N01+ GAAATATAACCCCCCCGGATCTCCAGGCTACCTGGTTGGAGGGCAAACCCCCAAAAGCTA
                      ____________________________________________________________
consensus GAAATATAACCCCCCCGGATCTCCAGGCTACCTGGTTGGAGGGCAAACCCCCAAAAGCTA
 
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JMSF005M22+ GCTTGAGAGGAAATATTCCAAAGCTCTTAAAACCCACATCCAAGATGATCTCTTGATTCA
JMSF036N01+ GCTTGAGAGGAAATATTCCAAAGCTCTTAAAACCCACATCCAAGATGATCTCTTGATTCA
                      ____________________________________________________________
consensus GCTTGAGAGGAAATATTCCAAAGCTCTTAAAACCCACATCCAAGATGATCTCTTGATTCA
 
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JMSF005M22+ AAATTGGGATTGCAACAAAAATTCAAATAAATAAAGCCATGAAGAGAGATATAATGAGCA
JMSF036N01+ AAATTGGGATTGCAACAAAAGTTCAAATAAATAAAGCCATGAAGAGAGATATAATGAGCA
                      ____________________________________________________________
consensus AAATTGGGATTGCAACAAAAGTTCAAATAAATAAAGCCATGAAGAGAGATATAATGAGCA
 
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JMSF005M22+ GAACTTACAGCCCTTTTCTTTCTCCGGACCGCT
JMSF036N01+ GAACTTACAGCCCTTTTCTTTCTCCGGACCGCTGAAAAGCTGTGGAAGCTCTTAACATGC
                      ____________________________________________________________
consensus GAACTTACAGCCCTTTTCTTTCTCCGGACCGCTGAAAAGCTGTGGAAGCTCTTAACATGC