| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038N01 | Sequence | 417 | 006827 (2) | gb:AP005808_1858217 | 1e-51 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJN | 727 | 010014 (2) | gb:AC016163_1538131 | 1e-40 | Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete sequence. |
| JMSF032H02 | Sequence | 709 | 006827 (2) | gb:AP005808_1858217 | 5e-87 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJN | 745 | 010014 (2) | gb:AC016163_1538131 | 5e-62 | Arabidopsis thaliana chromosome 1 BAC F26A9 genomic sequence, complete sequence. |
This contig is upended
. : . : . : . : . : . :
JMSF032H02+ CTGAATCATCACCTTCATGTGATCCAGAGGCNTCATAAGTAGATATGAA
____________________________________________________________
consensus CTGAATCATCACCTTCATGTGATCCAGAGGCNTCATAAGTAGATATGAA
. : . : . : . : . : . :
JMSF032H02+ AGCAGGATCCTCAAAAACAACATCTTCGTAAAAGCCAGCATTTGGCACATATGGATTTTC
____________________________________________________________
consensus AGCAGGATCCTCAAAAACAACATCTTCGTAAAAGCCAGCATTTGGCACATATGGATTTTC
. : . : . : . : . : . :
JMSF032H02+ AGTTGCTTCCCAAAGTGTATCTCGATAGTAATGATTTATTCTTAAAGCTTTTCCACGCAA
____________________________________________________________
consensus AGTTGCTTCCCAAAGTGTATCTCGATAGTAATGATTTATTCTTAAAGCTTTTCCACGCAA
. : . : . : . : . : . :
JMSF032H02+ GCCAGCTTTTAAAGCTTCAGTGCTGCTCATGGTAGTAGTCCCGACAGCTATAGGGGCAGG
____________________________________________________________
consensus GCCAGCTTTTAAAGCTTCAGTGCTGCTCATGGTAGTAGTCCCGACAGCTATAGGGGCAGG
. : . : . : . : . : . :
JMFF038N01+ CCCTTCAGC
JMSF032H02+ ATTTCCAGGAACTAACACTGCCCATGCCTCCCCAGCTGAGAATAATGGCAACCCTTCAGC
____________________________________________________________
consensus ATTTCCAGGAACTAACACTGCCCATGCCTCCCCAGCTGAGAATAATGGCAACCCTTCAGC
. : . : . : . : . : . :
JMFF038N01+ AGGAACATAGATGCCAGGGAACATCAAGTNTGCACCCCCAATCACAAAACGAGAAACTTC
JMSF032H02+ AGGAACATAGATGCCAGGGAACATCAAGTCTGCACCCCCAATCACAAAACGAGAAACTTC
____________________________________________________________
consensus AGGAACATAGATGCCAGGGAACATCAAGTCTGCACCCCCAATCACAAAACGAGAAACTTC
. : . : . : . : . : . :
JMFF038N01+ ACCTCCCTTAAGCACAAAAGCAGGCAAAAGTCCTGGGACCTTCCACAGAGCATAAACTGT
JMSF032H02+ ACCTCCCTTAAGCACAAAAGCAGGCAAAAGTCCTGGGACCTTCCACAGAGCATAAACTGT
____________________________________________________________
consensus ACCTCCCTTAAGCACAAAAGCAGGCAAAAGTCCTGGGACCTTCCACAGAGCATAAACTGT
. : . : . : . : . : . :
JMFF038N01+ GGGGAATATTTCATTGCCTCTCCCATCAATATCAAAAAACAAAGGGCAATCACCCTCCAA
JMSF032H02+ GGGGAATATTTCATTGCCTCTCCCATCAATATCAAAAAACAAAGGGCAATCACCCTCCAA
____________________________________________________________
consensus GGGGAATATTTCATTGCCTCTCCCATCAATATCAAAAAACAAAGGGCAATCACCCTCCAA
. : . : . : . : . : . :
JMFF038N01+ ACCATATACGAGAATACGATTTGGATATTTTGAAACTGTGAACTCTGCCTTAGGAGGAAG
JMSF032H02+ ACCATATACGAGAATACGATTTGGATATTTTGAAACTGTGAACTCTGCCTTAGGAGGAAG
____________________________________________________________
consensus ACCATATACGAGAATACGATTTGGATATTTTGAAACTGTGAACTCTGCCTTAGGAGGAAG
. : . : . : . : . : . :
JMFF038N01+ TAAAGTATCAATATCAGCATCGGATGCATTGGGGAAACGCTCTCTGATGGTCCGCCGGAG
JMSF032H02+ TAAAGTATCAATATCAGCATCGGATGCATTGGGGAAACGCTCTCTGATGGTCCGCCGGAG
____________________________________________________________
consensus TAAAGTATCAATATCAGCATCGGATGCATTGGGGAAACGCTCTCTGATGGTCCGCCGGAG
. : . : . : . : . : . :
JMFF038N01+ CTTCTTCCGGTCTGCGCCGGAAAGTCGTTGCTGCGACTTCGCCTCGACCGTCTTCTTGAA
JMSF032H02+ CTTCTTCCGGTCTGCGCCGGAAAGTCGTTGCTGCGACTTCGCCTCGACCGTCTTCTTGAA
____________________________________________________________
consensus CTTCTTCCGGTCTGCGCCGGAAAGTCGTTGCTGCGACTTCGCCTCGACCGTCTTCTTGAA
. : . : . : . : . : . :
JMFF038N01+ CATCTCTTCCTTCTGTAGAGTGGCGGATATGATATTTCAGTTTCGAGT
JMSF032H02+ CATCTCTTCCTTCTGTAGAGTGGCGGATATGATATTTCAGTTTCGAGTGAGAGATTCTTC
____________________________________________________________
consensus CATCTCTTCCTTCTGTAGAGTGGCGGATATGATATTTCAGTTTCGAGTGAGAGATTCTTC