Previous Contig 006793:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004J10Sequence436006793 (2)762008337 (2)gb:AY072114_15670081e-83Arabidopsis thaliana unknown protein (At3g62660) mRNA, complete cds.>gb:AY096607
JMSF032B17Sequence531006793 (2)677008337 (2)gb:AY072114_15670088e-90Arabidopsis thaliana unknown protein (At3g62660) mRNA, complete cds.>gb:AY096607

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF004J10+ ATTTCATTATCCAAAGCATCTTCNTANCGGAG
JMSF032B17+ GNGGAGACGAACCACGAGAATTTCATTATCCAAAGCATCTTCCTAACGGAG
                      ____________________________________________________________
consensus GNGGAGACGAACCACGAGAATTTCATTATCCAAAGCATCTTCCTAACGGAG
 
. : . : . : . : . : . :
JMFF004J10+ ANACCTCCTCTCTTCCTCTTCTTCCTCTTCAATNTAAAGCGCANCACCCGAGAAGAGCAC
JMSF032B17+ AAACCTCCTCTCTTCCTCTTCTTCCTCTTCAATTTAAAGCGCAACANCCGAGAAGAGCAC
                      ____________________________________________________________
consensus AAACCTCCTCTCTTCCTCTTCTTCCTCTTCAATTTAAAGCGCAACACCCGAGAAGAGCAC
 
. : . : . : . : . : . :
JMFF004J10+ AGAGAAGAAAAGAGGAACTCTAGGGTTCCTCTACCGTCCGCCAGATTGTGGCAGAGAGGN
JMSF032B17+ AGAGAAGAAAAGAGGAACTCTAGGGTTCCTCTACCGTCCGCCAGATTGTGGCAGAGAGGT
                      ____________________________________________________________
consensus AGAGAAGAAAAGAGGAACTCTAGGGTTCCTCTACCGTCCGCCAGATTGTGGCAGAGAGGT
 
. : . : . : . : . : . :
JMFF004J10+ GGGGNTTCCTCGCACTGCTGCTATATACCAAATTAATGCCAACTCCCAAAAAATCACAAA
JMSF032B17+ GGGGCTTCCTCGCACTGCTGCTATATACCAAATTAATGCCAACTCCCAAAAAATCACAAA
                      ____________________________________________________________
consensus GGGGCTTCCTCGCACTGCTGCTATATACCAAATTAATGCCAACTCCCAAAAAATCACAAA
 
. : . : . : . : . : . :
JMFF004J10+ TTATTTGATGTNTGACTATATGTATATATATATATATATGCCTTGCCTGAGTTGCCTCTA
JMSF032B17+ TTATTTGATGTTTGACTATATGTATATATATATATATATGCCTTGCCTGAGTTGCCTCTA
                      ____________________________________________________________
consensus TTATTTGATGTTTGACTATATGTATATATATATATATATGCCTTGCCTGAGTTGCCTCTA
 
. : . : . : . : . : . :
JMFF004J10+ CTCCGACGCCACCAGAAACCAAGCAAACTCAAAAAACACAGCAAATGTAGCGGCGGCGCT
JMSF032B17+ CTCCGACGCCACCAGAAACCAAGCAAACTCAAAAAACACAGCAAATGTAGCGGCGGCGCT
                      ____________________________________________________________
consensus CTCCGACGCCACCAGAAACCAAGCAAACTCAAAAAACACAGCAAATGTAGCGGCGGCGCT
 
. : . : . : . : . : . :
JMFF004J10+ GCACCGCCGGCGACACCAATCCACAGTCTTCCCTTCCCCTCTCTCTCTCTCTCTCTCTCC
JMSF032B17+ GCACCGCCGGCGACACCAATCCACAGTCTTCCCTTCCCCTCTCTCTCTCTCTCTCTCTCC
                      ____________________________________________________________
consensus GCACCGCCGGCGACACCAATCCACAGTCTTCCCTTCCCCTCTCTCTCTCTCTCTCTCTCC
 
. : . : . : . : . : . :
JMFF004J10+ TTTCTCTCTTATCCGGAGAAGGTGAAGCAAAAGCGCAGTCACAC
JMSF032B17+ TTTCTCTCTTATCCGGAGAAGGTGAAGCAAAAGCGCAGTCACACAACTGGAGAATAGAGA
                      ____________________________________________________________
consensus TTTCTCTCTTATCCGGAGAAGGTGAAGCAAAAGCGCAGTCACACAACTGGAGAATAGAGA
 
. : . : . : . : . : . :
JMSF032B17+ GGGAAGGATGGGTATAGAGGAGAGAGGGAGAGAGGCATTGAAGTTTTAGAGGAGCCTTTC
                      ____________________________________________________________
consensus GGGAAGGATGGGTATAGAGGAGAGAGGGAGAGAGGCATTGAAGTTTTAGAGGAGCCTTTC