Previous Contig 006758:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031L12Sequence630006758 (2)gb:ATY16255_15575302e-05Arabidopsis thaliana ak-lys2 gene.743013907 (2)gb:AF135862_17710942e-99Glycine max precursor monofunctional aspartokinase mRNA, complete cds.
JMSF050N17Sequence668006758 (2)gb:AB007650_15102337e-22Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA22.764013907 (2)gb:AF135862_1771094e-100Glycine max precursor monofunctional aspartokinase mRNA, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050N17+ TGCTCCAGCCAGTAAGA
                      ____________________________________________________________
consensus TGCTCCAGCCAGTAAGA
 
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JMSF050N17+ GGTTGTTTGTAGTCTTTCCCATAGCTGAGAGAACAATAACAGGCTTCTCCTCTGGAAAGC
                      ____________________________________________________________
consensus GGTTGTTTGTAGTCTTTCCCATAGCTGAGAGAACAATAACAGGCTTCTCCTCTGGAAAGC
 
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JMSF050N17+ TGAGGATGAGGTCAGCTACTTCTCTCATCCTCTGGGCAGAGGCTACTGATGAACCACCAA
JMSF031L12+ TCTGGGCAGAGGCTACTGATGAACCACCAA
                      ____________________________________________________________
consensus TGAGGATGAGGTCAGCTACTTCTCTCATCCTCTGGGCAGAGGCTACTGATGAACCACCAA
 
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JMSF050N17+ ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
JMSF031L12+ ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
                      ____________________________________________________________
consensus ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
 
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JMSF050N17+ TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
JMSF031L12+ TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
                      ____________________________________________________________
consensus TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
 
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JMSF050N17+ AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
JMSF031L12+ AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
                      ____________________________________________________________
consensus AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
 
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JMSF050N17+ ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
JMSF031L12+ ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
                      ____________________________________________________________
consensus ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
 
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JMSF050N17+ TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
JMSF031L12+ TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
                      ____________________________________________________________
consensus TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
 
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JMSF050N17+ TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
JMSF031L12+ TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
                      ____________________________________________________________
consensus TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
 
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JMSF050N17+ CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
JMSF031L12+ CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
                      ____________________________________________________________
consensus CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
 
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JMSF050N17+ CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
JMSF031L12+ CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
                      ____________________________________________________________
consensus CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
 
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JMSF050N17+ TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAA
JMSF031L12+ TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAATAATGCGAACG
                      ____________________________________________________________
consensus TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAATAATGCGAACG
 
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JMSF031L12+ CAGCTCTCTCAAGTCTAGTCTAAGGCAACCCGGCGGCGCGGCAAGGCAATTGCGCATTCC
                      ____________________________________________________________
consensus CAGCTCTCTCAAGTCTAGTCTAAGGCAACCCGGCGGCGCGGCAAGGCAATTGCGCATTCC