Previous Contig 006744:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN018B15+                               AAAGATGTCTTGGATAGAGATATAGACTAACTGGAAGTCT
rJMFF027A13-                                                                   TCT
JMFN010O10+               AAAGGAGAAGTCGGCAAAAGATGTCTTGGATAGAGATATAGACTAACTGGAAGTCT
                      ____________________________________________________________
consensus                 AAAGGAGAAGTCGGCAAAAGATGTCTTGGATAGAGATATAGACTAACTGGAAGTCT
 
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JMFN018B15+           ATTGGTCAACAGTTGTGACCTGTTGCCACTCCCCGTCAACTGCTTCATTCCATAGTGTGA
rJMFF027A13-          ATTGGTCAACAGTTGTGACCTGTTGCCACTCCCCGTCAACTGCTTCATTCCATAGTGTGA
JMFN010O10+           ATTGGTCAACAGTTGTGACCTGTTGCCACTCCCCGTCAACTGCTTCATTCCATAGTGTGA
                      ____________________________________________________________
consensus             ATTGGTCAACAGTTGTGACCTGTTGCCACTCCCCGTCAACTGCTTCATTCCATAGTGTGA
 
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JMFN018B15+           CATTGTTGTCCCCAGAAGCTACGGCTAACAGGTTTCCAGTCAAAGACCATGAGACCCTCC
rJMFF027A13-          CATTGTTGTCCCCAGAANCTACGGCTAACNGGTTTCCAGTCAAAGACCATGANACCCTCC
JMFN010O10+           CATTGTTGTCCCCAGAAGCTACGGCTAACAGGTTTCCAGTCAAAGACCATGAGACCCTCC
                      ____________________________________________________________
consensus             CATTGTTGTCCCCAGAAGCTACGGCTAACAGGTTTCCAGTCAAAGACCATGAGACCCTCC
 
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JMFN018B15+           AAACGGGTGTGTTAAAGTCATACAAAACCTTTCCTTCCCACTGATCTCCTTCTTTTGCCA
rJMFF027A13-          AAACGGGTGTGTTAAAGTCATACAAAACCTTTCCTTCCCACTGATCTCCTTCTTTTGCCA
JMFN010O10+           AAACGGGTGTGTTAAAGTCATACAAAACCTTTCCTTCCCACTGATCTCCTTCTTTTGCCA
                      ____________________________________________________________
consensus             AAACGGGTGTGTTAAAGTCATACAAAACCTTTCCTTCCCACTGATCTCCTTCTTTTGCCA
 
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JMFN018B15+           CAGTCCATATCACAACTTTACCATCCTCTGAAGCACTTGCAATTGTTGATTTTGGAAGCC
rJMFF027A13-          CAGTCCATATCACAACTTTACCATCCTCTGAAGCACTTGCAATTGTTGATTTTGGAAGCC
JMFN010O10+           CAGTCCATATCACAACTTTACCATCCTCTGAAGCACTTGCAATTGTTGATTTTGGAAGCC
                      ____________________________________________________________
consensus             CAGTCCATATCACAACTTTACCATCCTCTGAAGCACTTGCAATTGTTGATTTTGGAAGCC
 
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JMFN018B15+           CCAAATTGGGTGCCCACGCAACATCCCTCACCCAGTTAGTGTGCATCTGAAGGGCAGGGA
rJMFF027A13-          CCAAATTGGGTGCCCACGCAACATCCCTCACCCAGNTAGTGTGCATCTGAAGGGCAGGGA
JMFN010O10+           CCAAATTGGGTGCCCACGCAACATCCCTCACCCAGTTAGTGTGCATCTGAAGGGCAGGGA
                      ____________________________________________________________
consensus             CCAAATTGGGTGCCCACGCAACATCCCTCACCCAGTTAGTGTGCATCTGAAGGGCAGGGA
 
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JMFN018B15+           AGCAATCCATCTTCCAAACACCATTATAAAGCTTCCACACCTTCACAGTGTTATCACACC
rJMFF027A13-          AGCAATCCATCTTCCAAACACCATTATAAAGCTTCCACACCTTCACAGTGTTATCACACC
JMFN010O10+           AGCAATCCATCTTCCAAACACCATTATAAAGCTTCCACACCTTCACAGTGTTATCACACC
                      ____________________________________________________________
consensus             AGCAATCCATCTTCCAAACACCATTATAAAGCTTCCACACCTTCACAGTGTTATCACACC
 
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JMFN018B15+           CAGCTGATGCAAGCTTCTGAACAGGGTCATGTAAACCAGAACCAACTAAAGCACCGGGAG
rJMFF027A13-          CANCTGATGCAAGCTTCTGAACAGGGTCNTGTAAACCAGAACCANCTAAAGCACCGGGAG
JMFN010O10+           CAGCTGATGCAAGCTTCTGAACAGGGTCATGTAAACCAGAACCAACTAAAGCACCGGGAG
JMSF031I07+                                                      AACTAAAGCACCGGGAG
                      ____________________________________________________________
consensus             CAGCTGATGCAAGCTTCTGAACAGGGTCATGTAAACCAGAACCAACTAAAGCACCGGGAG
 
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JMFN018B15+           CCATTGAAGGTGCCCATGAAACTGCAGTTACTCCAATAGGATGGGCCTGGTCTATTCTTG
rJMFF027A13-          CCATTGA                                                     
JMFN010O10+           CCATTGAAGGTGCCCATGAAACTGCAGTTACTCCAATAGGATGGGCCTGGTCTATTCTTG
JMSF031I07+           CCATTGAAGGTGCCCATGAAACTGCAGTTACTCCAATAGGATGGGCCTGGTCTATTCTTG
                      ____________________________________________________________
consensus             CCATTGAAGGTGCCCATGAAACTGCAGTTACTCCAATAGGATGGGCCTGGTCTATTCTTG
 
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JMFN018B15+           CAGTGTCCCAACCACCATCTGACCTCGCGGTGTAAACAGAGATGTTCCCATCAGATGATC
JMFN010O10+           CAGTGTCCCAACCACCATCTGACCTCGCGGTGTAAACAGAGATGTTCCCATTAGATGATC
JMFF027A13+                                           TAAACAGAGATGTTCCCATCAGATGATC
JMSF031I07+           CAGTGTCCCAACCACCATCTGACCTCGCGGTGTAAACAGAGATATTCCCATCAGATGATC
                      ____________________________________________________________
consensus             CAGTGTCCCAACCACCATCTGACCTCGCGGTGTAAACAGAGATGTTCCCATCAGATGATC
 
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JMFN018B15+           CACATGCCAAGCAAAGCCCAA                                       
JMFN010O10+           CACATGCCAAGCAAAGCCCAA                                       
JMFF027A13+           CACATGCCAAGCAAAGCCCAAGTTCATGAGGAGCCCACGAAATAGAATTAACTGAAGATT
JMSF031I07+           CACATGCCAAGCAAAGCCCAAGTTCATGAGGAGCCCACGAAATAGAATTAACTGAAGATT
                      ____________________________________________________________
consensus             CACATGCCAAGCAAAGCCCAAGTTCATGAGGAGCCCACGAAATAGAATTAACTGAAGATT
 
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JMFF027A13+           TGTGATCATTGAAAACATGAGCTTGTGTCCACTCATTTTGATTCCCTTCCTTCCAAACAA
JMSF031I07+           TGTGATCATTGAAAACATGAGCTTGTGTCCACTCATTTTGATTCCCTTCCTTCCAAACAA
                      ____________________________________________________________
consensus             TGTGATCATTGAAAACATGAGCTTGTGTCCACTCATTTTGATTCCCTTCCTTCCAAACAA
 
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JMFF027A13+           TGACTTTACCATCAAATGAACAGGAAGCCAGTAGTGAACCAAATTTAGGGTGTGCCCATG
JMSF031I07+           TGACTTTACCATCAAATGAACAGGAAGCCAGTAGTGAACCAAATTTAGGGTGTGCCCATG
                      ____________________________________________________________
consensus             TGACTTTACCATCAAATGAACAGGAAGCCAGTAGTGAACCAAATTTAGGGTGTGCCCATG
 
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JMFF027A13+           AAACCTGCCAAACTGGACCATGATGACCGGCCAGAGTAGCAAGGTGCTGTGAAGTAGAGT
JMSF031I07+           AAACCTGCCAAACTGGACCATGATGACCGGCCAGAGTAGCAAGGTGCTGTGAAGTAGAGT
                      ____________________________________________________________
consensus             AAACCTGCCAAACTGGACCATGATGACCGGCCAGAGTAGCAAGGTGCTGTGAAGTAGAGT
 
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JMFF027A13+           TGTTGCTCACACCAATTATCTTGATGGAGGCATCAGATGAAGCTGTCGCCACACGTTTTC
JMSF031I07+           TGTTGCTCACACCAATTATCTTGATGGAGGCATCAGATGAAGCTGTCGCCACACGTTTTC
                      ____________________________________________________________
consensus             TGTTGCTCACACCAATTATCTTGATGGAGGCATCAGATGAAGCTGTCGCCACACGTTTTC
 
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JMFF027A13+           CATAGTAATCCATAGACACATCGTGAACTGTGTCACTGTGCCCTGTTTCAATTTTCTGTG
JMSF031I07+           CATAGTAATCCATAGACACATCGTGAACTGTGTCACTGTGCCCTGTTTCAATTTTCTGTG
                      ____________________________________________________________
consensus             CATAGTAATCCATAGACACATCGTGAACTGTGTCACTGTGCCCTGTTTCAATTTTCTGTG
 
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JMFF027A13+           CAGGCATCTTTCCTT                                             
JMSF031I07+           CAGGCATCTTTCCTTCCTTGTCACTACTACGTATGAATGTATGATCACCCTGGAACAGAG
                      ____________________________________________________________
consensus             CAGGCATCTTTCCTTCCTTGTCACTACTACGTATGAATGTATGATCACCCTGGAACAGAG
 
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JMSF031I07+           AATGTAACCGGGGATCGGCAGATCAGGTCAGAGGAAAACGCTGCGAACAGGAGAGGGAGA
                      ____________________________________________________________
consensus             AATGTAACCGGGGATCGGCAGATCAGGTCAGAGGAAAACGCTGCGAACAGGAGAGGGAGA
 
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JMSF031I07+           AACAGTCGCTACCCGGGAAACCTGAACACAGAGCAAACTATAGCCGACAATCAAATCCTC
                      ____________________________________________________________
consensus             AACAGTCGCTACCCGGGAAACCTGAACACAGAGCAAACTATAGCCGACAATCAAATCCTC