Previous Contig 006733:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020I15Sequence527006733 (3)gb:AF329506_17869912e-54Glycine max mitogen-activated protein kinase 2 mRNA, complete cds.722011257 (4)gb:NTU94192_1691927e-101Nicotiana tabacum salicylic acid-activated MAP kinase (NtSIPK) mRNA, complete cd
JMSF007E18Sequence484006733 (3)gb:AF329506_17869913e-49Glycine max mitogen-activated protein kinase 2 mRNA, complete cds.785011257 (4)gb:NTU94192_1691927e-102Nicotiana tabacum salicylic acid-activated MAP kinase (NtSIPK) mRNA, complete cd
JMSF031G01Sequence670006733 (3)gb:AF329506_17869911e-72Glycine max mitogen-activated protein kinase 2 mRNA, complete cds.764011257 (4)gb:NTU94192_1691927e-113Nicotiana tabacum salicylic acid-activated MAP kinase (NtSIPK) mRNA, complete cd

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031G01+ AATACNGACA
                      ____________________________________________________________
consensus AATACNGACA
 
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JMSF031G01+ GTGCTCCTNTGATAATGACTGATAGAGCGAATAATTTGATGAAGATCAGTGTCCATAAGC
                      ____________________________________________________________
consensus GTGCTCCTNTGATAATGACTGATAGAGCGAATAATTTGATGAAGATCAGTGTCCATAAGC
 
. : . : . : . : . : . :
JMSF031G01+ TCATATGCAATATAAACGTCATTGAATGACGCTCTCTGAGGAGGTGGTATTATATCTCTA
                      ____________________________________________________________
consensus TCATATGCAATATAAACGTCATTGAATGACGCTCTCTGAGGAGGTGGTATTATATCTCTA
 
. : . : . : . : . : . :
JMSF007E18+ GATCCATGTGGCGAAGCAACTTGATCTCACGCAGAGTCCTC
JMFF020I15+ CAACAATATTTTCGTGATCCATGTGGCGAAGCAACTTGATCTCACGCAGAGTCCTC
JMSF031G01+ ATTGCAACAATATTTTCGTGATCCATGTGGCGAAGCAACTTGATCTCACGCAGAGTCCTC
                      ____________________________________________________________
consensus ATTGCAACAATATTTTCGTGATCCATGTGGCGAAGCAACTTGATCTCACGCAGAGTCCTC
 
. : . : . : . : . : . :
JMSF007E18+ TNGGCGTCGATTTTGTTATCAAAAGCATTCGCTATTTTCTTNATCGTTACGTGCTCATTC
JMFF020I15+ TTGGCGTCGATTTTGTTATCAAAAGCATTCGCTATTTTCTTTATCGCTACGTGCTCATTC
JMSF031G01+ TTGGCGTCGATTTTGTTATCAAAAGCATTCGCTATTTTCTTTATCGCTACGTGCTCATTC
                      ____________________________________________________________
consensus TTGGCGTCGATTTTGTTATCAAAAGCATTCGCTATTTTCTTTATCGCTACGTGCTCATTC
 
. : . : . : . : . : . :
JMSF007E18+ GTTTCCGAATTCAAAGCAGAACAGACGATTCCATATGCGCCTTTGCCGATAGGCATGATG
JMFF020I15+ GTTTCCGAATTCAAAGCAGAACAGACGATTCCATATGCGCCTTTGCCGATAGGCATGATG
JMSF031G01+ GTTTCCGAATTCAAAGCAGAACAGACGATTCCATATGCGCCTTTGCCGATAGGCATGATG
                      ____________________________________________________________
consensus GTTTCCGAATTCAAAGCAGAACAGACGATTCCATATGCGCCTTTGCCGATAGGCATGATG
 
. : . : . : . : . : . :
JMSF007E18+ GGAGGCTTGTATTTGGCTGTGACCTCAAAGACGTTGCCGAAGATGTTGTATTGGATGAAT
JMFF020I15+ GGAGGCTTGTATTTGGCTGTGACCTCAAAGACGTTGCCGAAGATGTTGTATTGGATGAAT
JMSF031G01+ GGAGGCTTGTATTTGGCTGTGACCTCAAAGACGTTGCCGAAGATGTTGTATTGGATGAAT
                      ____________________________________________________________
consensus GGAGGCTTGTATTTGGCTGTGACCTCAAAGACGTTGCCGAAGATGTTGTATTGGATGAAT
 
. : . : . : . : . : . :
JMSF007E18+ CTGCCGCCGTGACTGAGTGTTGCCGGAATGTTGTCGATCCCGGGCACCGGAGGCTGAGGT
JMFF020I15+ CTGCCGCCGTGACTGAGTGTTGCCGGAATGTTGTCGATCCC
JMSF031G01+ CTGCCGCCGTGACTGAGTGTTGCCGGAATGTTGTCGATCCCGGGCACCGGAGGCTGAGGT
                      ____________________________________________________________
consensus CTGCCGCCGTGACTGAGTGTTGCCGGAATGTTGTCGATCCCGGGCACCGGAGGCTGAGGT
 
. : . : . : . : . : . :
JMSF007E18+ GGCGCAGCCTCCGACATCACCGTGTCCGCCGGCTGAGCCGAACCACCGTCCATTTTCCTC
JMSF031G01+ GGCGCAGCCTCCGACATCACCGTGTCCGCCGGCTGAGCCGAACCACCGTCCATTTTCCTC
                      ____________________________________________________________
consensus GGCGCAGCCTCCGACATCACCGTGTCCGCCGGCTGAGCCGAACCACCGTCCATTTTCCTC
 
. : . : . : . : . : . :
JMSF007E18+ CGAAACAAATCACAATTGGTGATAATTTGATTGTTGGAAACAGCAATAGTGATTACAGGA
JMSF031G01+ CGAAACAAATCACAATTGGTGATAATTTGATTGTTGGAAACAGCAATAGTGATTACAGGA
                      ____________________________________________________________
consensus CGAAACAAATCACAATTGGTGATAATTTGATTGTTGGAAACAGCAATAGTGATTACAGGA
 
. : . : . : . : . : . :
JMSF007E18+ AATATTATCTTATGAACAAACCCTAGATTGAATTTAGTTTCGTTTAAGACTACAATTATT
JMSF031G01+ AATATTATCTTATGAACAAACCCTAGATTGAATTTAGTTTCGTTTAAGACTACAATTATT
                      ____________________________________________________________
consensus AATATTATCTTATGAACAAACCCTAGATTGAATTTAGTTTCGTTTAAGACTACAATTATT
 
. : . : . : . : . : . :
JMSF007E18+ GAGCAGTTTATAAGGTTTGTCCC
JMSF031G01+ GAGCAGTTTATAAGGTTTGTCCCCTAGTCGGAGATGAAGGGATCTCTCAAATCTCAATTC
                      ____________________________________________________________
consensus GAGCAGTTTATAAGGTTTGTCCCCTAGTCGGAGATGAAGGGATCTCTCAAATCTCAATTC