Previous Contig 006645:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K24Sequence557006645 (5)gb:AY059897_15647415e-38Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16) 628008508 (5)gb:AY059897_15647416e-43Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16)
JMFF030I03Sequence351006645 (5)gb:AY059897_15647413e-19Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16) 674008508 (5)gb:AB008267_15104276e-67Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4.
JMFS017B02Sequence605006645 (5)gb:AY059897_15647415e-52Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16)
JMSF030C02Sequence672006645 (5)pir|T45569|T455692e-19receptor protein kinase-like protein - Arabidopsis thaliana>gb:ATF11C1_1548241 A636008508 (5)gb:AB008267_15104272e-66Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4.
JMSF052G17Sequence681006645 (5)gb:AY059897_15647412e-56Arabidopsis thaliana receptor protein kinase-like protein (At5g67200; K21H1.16) 910008508 (5)gb:AB008267_1510427e-109Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4.

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052G17+ CAGAGAGCTTTGTTGGAGGCAAACGCCGTCGTTNTGAAGCG
                      ____________________________________________________________
consensus CAGAGAGCTTTGTTGGAGGCAAACGCCGTCGTTNTGAAGCG
 
. : . : . : . : . : . :
JMFS017B02+ ATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
JMSF052G17+ CGATAATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
                      ____________________________________________________________
consensus CGATAATGTGGGCGTCACCGGAATGGGACCGGAGAGAATATTCTGCGAAACGTTGAAGAT
 
. : . : . : . : . : . :
JMFS017B02+ CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
JMFF007K24+ GCCGGCANGGAGCNGTTGAGGCGGTTGGAGTNGAGACG
JMSF052G17+ CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
                      ____________________________________________________________
consensus CTGGAGAGTAGTTTGGTTGAGCGCCGGCACGGAGCCGTTGAGGCGGTTGGAGTCGAGACG
 
. : . : . : . : . : . :
JMFS017B02+ GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
JMFF007K24+ GAGATAGTACAACCGGTCCAGACCGTTGAANGACGCCGGAATGTTGCCGGTGAGGTTGTT
JMSF052G17+ GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
                      ____________________________________________________________
consensus GAGATAGTACAACCGGTCCAGACCGTTGAACGACGCCGGAATGTTGCCGGTGAGGTTGTT
 
. : . : . : . : . : . :
JMFS017B02+ GTGGGAGAGATCAAGGGTTTCGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMFF007K24+ GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMSF052G17+ GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
JMSF030C02+ TGGAGANTGGAGATTNAGGGAGGAATAAGTCC
                      ____________________________________________________________
consensus GTGGGAGAGATCAAGGGTTTTGAGGCGGTGGAGAGTGGAGATTGAGGGAGGAATAAGTCC
 
. : . : . : . : . : . :
JMFS017B02+ ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMFF007K24+ ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMFF030I03+ CGGGAAAGATCGGG
JMSF052G17+ ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
JMSF030C02+ NNTGAAGAGATTNCTGTCCAAAAACAGAACTTTCAGGTTANCCAGGCGGGAAAGATCGGG
                      ____________________________________________________________
consensus ACTGAAGAGATTACTGTCCAAAAACAGAACTTTCAGGTTAACCAGGCGGGAAAGATCGGG
 
. : . : . : . : . : . :
JMFS017B02+ AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMFF007K24+ AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMFF030I03+ AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMSF052G17+ AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
JMSF030C02+ AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTNTGAGCTGGTCAAGCCGAGT
                      ____________________________________________________________
consensus AATAGGTCCGGCGAGCGAGTTATCCTGCAAACTCAGAACTCTGAGCTGGTCAAGCCGAGT
 
. : . : . : . : . : . :
JMFS017B02+ CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMFF007K24+ CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMFF030I03+ CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMSF052G17+ CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
JMSF030C02+ CAGAGTATCCGGAGCAAAAACCCCATTCCAAACCCACCCTTTCACACACCAAACGAACCA
                      ____________________________________________________________
consensus CAGAGTATCCGGAGCAAAAACCCCA-TCCAAACCCACCCTTTCACACACCAAACGAACCA
 
. : . : . : . : . : . :
JMFS017B02+ CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMFF007K24+ CCTTTCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMFF030I03+ CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMSF052G17+ CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
JMSF030C02+ CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
                      ____________________________________________________________
consensus CCTTCCCTTCGCTACACTTCACGCCATTCCACTTGCAGAAACCCAAACTGTAGTTGGAAG
 
. : . : . : . : . : . :
JMFS017B02+ AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMFF007K24+ AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMFF030I03+ AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMSF052G17+ AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
JMSF030C02+ AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACACCAACAATGCCGACGCGT
                      ____________________________________________________________
consensus AAAACCCAAGCTTCCCTTTCAAGTCCGCCTTCACCTGAAACGCCAACAATGCCGACGCGT
 
. : . : . : . : . : . :
JMFS017B02+ CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMFF007K24+ CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMFF030I03+ CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMSF052G17+ CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
JMSF030C02+ CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
                      ____________________________________________________________
consensus CGGAGGGGATAACCGAGCTGGCAGAAGAAGAAGACGGAGATGGAAGAAGACTAGCAAACA
 
. : . : . : . : . : . :
JMFS017B02+ GCAAAACCATC
JMFF007K24+ GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT
JMFF030I03+ GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT
JMSF052G17+ GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGT
JMSF030C02+ GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGTACAAGAAAACAACTCAAGAACC
                      ____________________________________________________________
consensus GCAAAACCATCACGAGCAGCCCCACCATGTTTGGTTGTACAAGAAAACAACTCAAGAACC
 
. : . : . : . : . : . :
JMSF030C02+ GGGAATTAAAGGGGAGAGGTTGAGAAATTTTACAGTTTTACTTCCATGGAAAGTGAAAGA
                      ____________________________________________________________
consensus GGGAATTAAAGGGGAGAGGTTGAGAAATTTTACAGTTTTACTTCCATGGAAAGTGAAAGA
 
. : . : . : . : . : . :
JMSF030C02+ AAGAGGAGGGAATCGAGGGGTAAGCGACAAAAGCATACAAGAATGGCAGGAGTTGTCCTG
                      ____________________________________________________________
consensus AAGAGGAGGGAATCGAGGGGTAAGCGACAAAAGCATACAAGAATGGCAGGAGTTGTCCTG
 
. : . : . : . : . : . :
JMSF030C02+ TCCAGTAGGAGAGTAGAGTGTAAAGGCAGGGTCGGAGTCAGAATCACGTGAAGGGAACCC
                      ____________________________________________________________
consensus TCCAGTAGGAGAGTAGAGTGTAAAGGCAGGGTCGGAGTCAGAATCACGTGAAGGGAACCC