Previous Contig 006501:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS136E10Sequence613006501 (2)pir|T08540|T085409e-20hypothetical protein F27B13.30 - Arabidopsis thaliana>gb:ATCHRIV71_1546900 Arabi
JMSF027P18Sequence631006501 (2)pir|T08540|T085403e-18hypothetical protein F27B13.30 - Arabidopsis thaliana>gb:ATCHRIV71_1546900 Arabi729009944 (2)pir|T08540|T085403e-18hypothetical protein F27B13.30 - Arabidopsis thaliana>gb:ATCHRIV71_1546900 Arabi

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS136E10+ GCCTTACTGCAGCTTTCTCGAAGACCTAACTTTAGCCGTCTAACATCCT
                      ____________________________________________________________
consensus GCCTTACTGCAGCTTTCTCGAAGACCTAACTTTAGCCGTCTAACATCCT
 
. : . : . : . : . : . :
JMFS136E10+ CGGGTGAGGAAGAAGATAATGTTTTGCCTTTGAAGACACAGACGGAGAATCATCCAGGGG
JMSF027P18+ TTGAAGACACAGACGGAGAATCATCCAGGGG
                      ____________________________________________________________
consensus CGGGTGAGGAAGAAGATAATGTTTTGCCTTTGAAGACACAGACGGAGAATCATCCAGGGG
 
. : . : . : . : . : . :
JMFS136E10+ TACACCAAGAGCTAGACTCGTAAGTCGCTTAAAATCTATTTGTCTCAGTTTGTGTTCAGT
JMSF027P18+ TACACCAAGAGCTAGACTCGTAAGTCGCTTAAAATCTATTTGTCTCAGTTTGTGTTCAGT
                      ____________________________________________________________
consensus TACACCAAGAGCTAGACTCGTAAGTCGCTTAAAATCTATTTGTCTCAGTTTGTGTTCAGT
 
. : . : . : . : . : . :
JMFS136E10+ TACCATTGCTTTTGGATCAATACGTAAACATTGAAAGAATTTGACAACATCTCCCTGTGT
JMSF027P18+ TACCATTGCTTTTGGATCAATACGTAAACATTGAAAGAATTTGACAACATCTCCCTGTGT
                      ____________________________________________________________
consensus TACCATTGCTTTTGGATCAATACGTAAACATTGAAAGAATTTGACAACATCTCCCTGTGT
 
. : . : . : . : . : . :
JMFS136E10+ TGCACCTGAACTACTTCTTGTCATGTTTGGAAGAGAAGATAAGATTGGATTCTCCATGTT
JMSF027P18+ TGCACCTGAACTACTTCTTGTCATGTTTGGAAGAGAAGATAAGATTGGATTCTCCATGTT
                      ____________________________________________________________
consensus TGCACCTGAACTACTTCTTGTCATGTTTGGAAGAGAAGATAAGATTGGATTCTCCATGTT
 
. : . : . : . : . : . :
JMFS136E10+ TCTGTCAAGTGAAGTGGCTCCATAGGATCCACGCTGTGCAGATCCATACAATGGCCTATC
JMSF027P18+ TCTGTCAAGTGAAGTGGCTCCATAGGATCCACGCTGTGCAGATCCATACAATGGCCTATC
                      ____________________________________________________________
consensus TCTGTCAAGTGAAGTGGCTCCATAGGATCCACGCTGTGCAGATCCATACAATGGCCTATC
 
. : . : . : . : . : . :
JMFS136E10+ TGGACTACTGGAAGTGAGATCATACTTATTAGATGCAGACATTGCATCAGTTCCCGAATG
JMSF027P18+ TGGACTACTGGAAGTGAGATCATACTTATTAGATGCAGACATTGCATCAGTTCCCGAATG
                      ____________________________________________________________
consensus TGGACTACTGGAAGTGAGATCATACTTATTAGATGCAGACATTGCATCAGTTCCCGAATG
 
. : . : . : . : . : . :
JMFS136E10+ CTTTCCTTGTTATACACCCCGTTAGCACAGTTTTGCATGGCAATGCTGTTCAACAACTGT
JMSF027P18+ CTTTCCTTGTTATACACCCCGTTAGCACAGTTTTGCATGGCAATGCTGTTCAACAACTGT
                      ____________________________________________________________
consensus CTTTCCTTGTTATACACCCCGTTAGCACAGTTTTGCATGGCAATGCTGTTCAACAACTGT
 
. : . : . : . : . : . :
JMFS136E10+ GCATGAATACCAAGCACATACCCGTGACAATAAAATTAGGGTTACAATGTTCCTGGTAAC
JMSF027P18+ GCATGAATACCAAGCACATACCCGTGACAATAAAATTAGGGTTACAATGTTCCTGGTAAC
                      ____________________________________________________________
consensus GCATGAATACCAAGCACATACCCGTGACAATAAAATTAGGGTTACAATGTTCCTGGTAAC
 
. : . : . : . : . : . :
JMFS136E10+ TTTTCACTGTATATACACTCTAAAGCCTGAAGAACCCGCGTGATCTGTACAGCCTCTGAT
JMSF027P18+ TTTTCACTGTATATACACTCTAAAGCCTGAAGAACCCGCGTGATCTGTACAGCCTCTGAT
                      ____________________________________________________________
consensus TTTTCACTGTATATACACTCTAAAGCCTGAAGAACCCGCGTGATCTGTACAGCCTCTGAT
 
. : . : . : . : . : . :
JMFS136E10+ GTCAAAATTACGGACGTCGAAGGA
JMSF027P18+ GTCAAAATTACGGACGTCGAAGGAGTCGTTGATCGGTGGAAGAAGGTCGTCGTGCTCGTG
                      ____________________________________________________________
consensus GTCAAAATTACGGACGTCGAAGGAGTCGTTGATCGGTGGAAGAAGGTCGTCGTGCTCGTG
 
. : . : . : . : . : . :
JMSF027P18+ GAGAGTCGATCGAGAAATATACGTTGGATCTTTTCTTTTTTCAGTCTTTGAGTCGCTCTC
                      ____________________________________________________________
consensus GAGAGTCGATCGAGAAATATACGTTGGATCTTTTCTTTTTTCAGTCTTTGAGTCGCTCTC