Previous Contig 006402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS154F06Sequence608006402 (4)gb:AF320248_17858346e-46Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2)
JMSF026L19Sequence650006402 (4)gb:AF320248_17858342e-39Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2) 786012494 (3)gb:AF320248_17858341e-05Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2)
JMSF029K06Sequence665006402 (4)gb:AF320248_17858343e-44Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2) 763012494 (3)gb:AF320248_17858349e-06Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2)
JMSF033M04Sequence656006402 (4)gb:AF320248_17858346e-45Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2) 740012494 (3)gb:AF320248_17858349e-06Arabidopsis thaliana phragmoplast-associated kinesin-related protein 2 (PAKRP2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS154F06+ TATTTCCTTCAACGATCGGTAC
JMSF033M04+ TCAACGATCGGTAC
JMSF029K06+ TCAACGATCGGTAC
                      ____________________________________________________________
consensus TATTTCCTTCAACGATCGGTAC
 
. : . : . : . : . : . :
JMFS154F06+ ACAATTCCGGGCTGCTTGGAGCTACCAAACATGGTGTGACTCTTCCCAGCACCGGTTGGA
JMSF033M04+ ACAATTCCGGGCTGCTTGGAGCTACCAAACATGGTGTGACTCTTCCCAGCACCGGTTGGA
JMSF029K06+ ACAATTCCGGGCTGCTNGGAGCTACCAAACATGGTGTGACTCTTCCCAGCACCGGTTGGA
JMSF026L19+ GCTGCTNGGAGCTACCAAACATGGTGTGACTCTTCCCAGCACCGGTTGGA
                      ____________________________________________________________
consensus ACAATTCCGGGCTGCTTGGAGCTACCAAACATGGTGTGACTCTTCCCAGCACCGGTTGGA
 
. : . : . : . : . : . :
JMFS154F06+ CCGTACATCATAATGGTACATTTAGCCCCCAATTTCACCCCATTGATCCTCGCCTCGACG
JMSF033M04+ CCGTACATCATAATGGTACATTTAGCCCCCAATTTCACCCCATTGATCCTCGCCTCGACG
JMSF029K06+ CCGTACATCATAATGGTACATTTAGCCCCCAATTTCACCCCATTGATCCTCGCCTCGACG
JMSF026L19+ CCGTACATCATAATGGTACATTTAGCCCCCAATTTCACCCCATTGATCCTCGCCTCGACG
                      ____________________________________________________________
consensus CCGTACATCATAATGGTACATTTAGCCCCCAATTTCACCCCATTGATCCTCGCCTCGACG
 
. : . : . : . : . : . :
JMFS154F06+ AATTTCTTGTAGAAAAGATCGATATCTTCTTCCTCGGAGAAGGAAACCCCGTCAAGGTGA
JMSF033M04+ AATTTCTTGTAGAAAAGATCGATATCTTCTTCCTCGGAGAAGGAAACCCCGTCAAGGTGA
JMSF029K06+ AATTTCTTGTAGAAAAGATCGATATCTTCTTCCTCGGAGAAGGAAACCCCGTCAAGGTGA
JMSF026L19+ AATTTCTTGTAGAAAAGATCGATATCTTCTTCCTCGGAGAAGGAAACCCCGTCAAGGTGA
                      ____________________________________________________________
consensus AATTTCTTGTAGAAAAGATCGATATCTTCTTCCTCGGAGAAGGAAACCCCGTCAAGGTGA
 
. : . : . : . : . : . :
JMFS154F06+ AAGTCTCGGTAGCCTATATCAGTCTTCACCCTCAACGACTGGCGGTCGGCGTTCAACTTT
JMSF033M04+ AAGTCTCGGTAGCCTATATCAGTCTTCACCCTCAACGACTGGCGGTCGGCGTTCAACTTT
JMSF029K06+ AAGTCTCGGTAGCCTATATCAGTCTTCACCCTCAACGACTGGCGGTCGGCGTTCAACTTT
JMSF026L19+ AAGTCTCGGTAGCCTATATCAGTCTTCACCCTCAACGACTGGCGGTCGGCGTTCAACTTT
                      ____________________________________________________________
consensus AAGTCTCGGTAGCCTATATCAGTCTTCACCCTCAACGACTGGCGGTCGGCGTTCAACTTT
 
. : . : . : . : . : . :
JMFS154F06+ AGGGCCGCCTGGGGCTTCTCTTTCCGATCCGGGTAGTCTCGGATCCGACCCACAACTTCC
JMSF033M04+ AGGGCCGCCTGGGGCTTCTCTTTCCGATCCGGGTAGTCTCGGATCCGACCCACAACTTCC
JMSF029K06+ AGGGCCGCCTGGGGCTTCTCTTTCCGATCCGGGTAGTCTCGGATCCGACCCACAACTTCC
JMSF026L19+ AGGGCCGCCTGGGGCTTCTCTTTCCGATCCGGGTAGTCTCGGATCCGACCCACAACTTCC
                      ____________________________________________________________
consensus AGGGCCGCCTGGGGCTTCTCTTTCCGATCCGGGTAGTCTCGGATCCGACCCACAACTTCC
 
. : . : . : . : . : . :
JMFS154F06+ ACCGGGTGCTCCGCCGGCGGGGCTTCTTTTGCGGCGGGGTTCGGGGATGGCCTGGCGAGG
JMSF033M04+ ACCGGGTGCTCCGCCGGCGGGGCTTCTTTTGCGGCGGGGTTCGGGGATGGCCTGGCGAGG
JMSF029K06+ ACCGGGTGCTCCGCCGGCGGGGCTTCTTTTGCGGCGGGGTTCGGGGATGGCCTGGCGAGG
JMSF026L19+ ACCGGGTGCTCCGCCGGCGGGGCTTCTTTTGCGGCGGGGTTCGGGGATGGCCTGGCGAGG
                      ____________________________________________________________
consensus ACCGGGTGCTCCGCCGGCGGGGCTTCTTTTGCGGCGGGGTTCGGGGATGGCCTGGCGAGG
 
. : . : . : . : . : . :
JMFS154F06+ TTGAAGTTCAGGCGGTGTTTGGATTGAGGTGTCTTCGGGTTCCCGAAATGGGTCTGGTTC
JMSF033M04+ TTGAAGTTCAGGCGGTGTTTGGATTGAGGTGTCTTCGGGTTCCCGAAATGGGTCTGGTTC
JMSF029K06+ TTGAAGTTCAGGCGGTGTTTGGATTGAGGTGTCTTCGGGTTCCCGAAATGGGTCTGGTTC
JMSF026L19+ TTGAAGTTCAGGCGGTGTTTGGATTGAGGTGTCTTCGGGTTCCCGAAATGGGTCTGGTTC
                      ____________________________________________________________
consensus TTGAAGTTCAGGCGGTGTTTGGATTGAGGTGTCTTCGGGTTCCCGAAATGGGTCTGGTTC
 
. : . : . : . : . : . :
JMFS154F06+ GATTTTGCCGATGGAGTGGGCGCCATTTACACCATAAAAAATTCAAAATGCTTTATGGAT
JMSF033M04+ GATTTTGCCGATGGAGTGGGCGCCATTTACACCATAAAAAATTCAAAATGCTTTATGGAT
JMSF029K06+ GATTTTGCCGATGGAGTGGGCGCCATTTACACCATAAAAAATTCAAAATGCTTTATGGAT
JMSF026L19+ GATTTTGCCGATGGAGTGGGCGCCATTTACACCATAAAAAATTCAAAATGCTTTATGGAT
                      ____________________________________________________________
consensus GATTTTGCCGATGGAGTGGGCGCCATTTACACCATAAAAAATTCAAAATGCTTTATGGAT
 
. : . : . : . : . : . :
JMFS154F06+ TTTTCTTCCAAATCTCGAAGAACTCAGAATTTGCGACGAGCTTTGAGTGTAGAAATCTGC
JMSF033M04+ TTTTCTTCCAAATCTCGAAGAACTCAGAATTTGCGACGAGCTTTGAGTGTAGAAATCTGC
JMSF029K06+ TTTTCTTCCAAATCTCGAAGAACTCAGAATTTGCGACGAGCTTTGAGTGTAGAAATCTGC
JMSF026L19+ TTTTCTTCCAAATCTCGAAGAACTCAGAATTTGCGACGAGCTTTGAGTGTAGAAATCTGC
                      ____________________________________________________________
consensus TTTTCTTCCAAATCTCGAAGAACTCAGAATTTGCGACGAGCTTTGAGTGTAGAAATCTGC
 
. : . : . : . : . : . :
JMFS154F06+ AGTGAGGGCTTTTGGGCGTTTGAATTCAAGATTTGACTTTTGGGAG
JMSF033M04+ AGTGAGGGCTTTTGGGCGTTTGAATTCAAGATTTGACTTTTGGGAGAAAAATGGCTAAAA
JMSF029K06+ AGTGAGGGCTTTTGGGCGTTTGAATTCAAGATTTGACTTTTGGGAGAAAAATGGCTAAAA
JMSF026L19+ AGTGAGGGCTTTTGGGCGTTTGAATTCAAGATTTGACTTTTGGGAGAAAAATGGCTAAAA
                      ____________________________________________________________
consensus AGTGAGGGCTTTTGGGCGTTTGAATTCAAGATTTGACTTTTGGGAGAAAAATGGCTAAAA
 
. : . : . : . : . : . :
JMSF033M04+ ATGGAGCAGAAGAAATGAAGGGTTTTTTTGAGGAATTAAG
JMSF029K06+ ATGGAGCAGAAGAAATGAAGGGTTTTTTTGAGGAATTAAGGCTTTTCA
JMSF026L19+ ATGGAGCAGAAGAAATGAAGGGTTTTTTTGAGGAATTAAGGCTTTTCATTGATTGAACTC
                      ____________________________________________________________
consensus ATGGAGCAGAAGAAATGAAGGGTTTTTTTGAGGAATTAAGGCTTTTCATTGATTGAACTC