| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN037I15 | Sequence | 545 | 006233 (2) | gb:AY084270_1569362 | 4e-37 | Arabidopsis thaliana clone 101865 mRNA, complete sequence. | |||||
| JMSF024K13 | Sequence | 645 | 006233 (2) | gb:AY084270_1569362 | 1e-45 | Arabidopsis thaliana clone 101865 mRNA, complete sequence. | 740 | 002092 (20) | gb:AY364011_1602813 | 9e-80 | Daucus carota calmodulin 4 mRNA, partial cds.>gb:AY364012_1602814 Daucus carota |
This contig is upended
. : . : . : . : . : . :
JMSF024K13+ ATCGCCGGCATGGACTCGCACGCNTCCCACGTGCCAGCCCCCACG
____________________________________________________________
consensus ATCGCCGGCATGGACTCGCACGCNTCCCACGTGCCAGCCCCCACG
. : . : . : . : . : . :
JMFN037I15+ GTCGCACGTGCCGCCGGCGACGACG
JMSF024K13+ TTGTAAATCTCCACCGCGAGGGGGTCGTCCTCGAAGTCGCACGTGCCGCCGGCGACGACG
____________________________________________________________
consensus TTGTAAATCTCCACCGCGAGGGGGTCGTCCTCGAAGTCGCACGTGCCGCCGGCGACGACG
. : . : . : . : . : . :
JMFN037I15+ ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
JMSF024K13+ ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
____________________________________________________________
consensus ATGTAGCCGCCCACGTGCGCCACGATGGGGTCCGTCCGCCACACCTTCGGCGCCTCGACG
. : . : . : . : . : . :
JMFN037I15+ TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
JMSF024K13+ TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
____________________________________________________________
consensus TGGCGCCACGCGACGTTGAGCGCGTCGAAGGAAAACGAAAACGTCGTCGGGGACAACATG
. : . : . : . : . : . :
JMFN037I15+ TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
JMSF024K13+ TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
____________________________________________________________
consensus TAAAGCAGGTTGGAGTGCGAGGAACGGAGGGCCGACACGTACTTGGCGGCCGGGTTCGAC
. : . : . : . : . : . :
JMFN037I15+ ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
JMSF024K13+ ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
____________________________________________________________
consensus ACCTCCACCCACGCGCAAGAGCGATGGTCGTAGGCGCGTGTCGCCATCTCGTATGGCCAC
. : . : . : . : . : . :
JMFN037I15+ CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
JMSF024K13+ CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
____________________________________________________________
consensus CGCGTGCTCTGCGTGTGAACCAACAACCACGGCTTCGGCTTGTTGAGCCACCGGAGAGAC
. : . : . : . : . : . :
JMFN037I15+ GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
JMSF024K13+ GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
____________________________________________________________
consensus GCCGTCACGGCGGAGTTCCATGACTTTGACACAGCCGACGCCGGCACCAAATCCACAAGC
. : . : . : . : . : . :
JMFN037I15+ GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
JMSF024K13+ GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
____________________________________________________________
consensus GGCACGTACGAAAGCACCACTTCCAAAATGTCACCGTGAATATGATCATTAGTCAAAGCC
. : . : . : . : . : . :
JMFN037I15+ ATTATACCCAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
JMSF024K13+ ATTATACACAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
____________________________________________________________
consensus ATTATACCCAACGAACCCAAATAATCTCTGATGGCTGATCGATTTTAAGGAAAGTGTGAA
. : . : . : . : . : . :
JMFN037I15+ CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAA
JMSF024K13+ CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAATGAGAAACTCGACTACCCTC
____________________________________________________________
consensus CGATTTGTAAATTGTAAATTTATTATAGGGTAATGGATAATGAGAAACTCGACTACCCTC