| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030C23 | Sequence | 509 | 006209 (4) | pir|T04628|T04628 | 1e-10 | cytochrome P450 homolog F10M6.190 - Arabidopsis thaliana>gb:ATCHRIV76_1547138 Ar | 468 | 006209 (4) | sp|Q9SL42|PIN1_ARATH | 6e-09 | Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) |
| JMFF044D05 | Sequence | 632 | 006209 (4) | gb:AP002484_1822232 | 3e-35 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 | 616 | 010405 (2) | pir|G96611|G96611 | 1e-21 | probable cytochrome P450 T8L23.21 [imported] - Arabidopsis thaliana>gb:AE005173_ |
| JMSF024F08 | Sequence | 707 | 006209 (4) | gb:AP002484_1822232 | 1e-37 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 | 727 | 010405 (2) | pir|G96611|G96611 | 2e-42 | probable cytochrome P450 T8L23.21 [imported] - Arabidopsis thaliana>gb:AE005173_ |
This contig is upended
. : . : . : . : . : . :
rJMFF030C23- ATGAAGTCAGGTAGTTGCCACGTTTAGCANAGCTGCAATCGGANAAGCAANATAT
____________________________________________________________
consensus ATGAAGTCAGGTAGTTGCCACGTTTAGCANAGCTGCAATCGGANAAGCAANATAT
. : . : . : . : . : . :
rJMFF030C23- GACNTCCTCNAAGTTGGACTTGCCGGAAAGGATATCGTCNCGAGNGGNGTTGCAAATAAT
____________________________________________________________
consensus GACNTCCTCNAAGTTGGACTTGCCGGAAAGGATATCGTCNCGAGNGGNGTTGCAAATAAT
. : . : . : . : . : . :
rJMFF030C23- ACGGNTCTCTGGGTCCTTCCAGGTCNCCTTGCGTCTGGAGCCCTGGNGTTTGACNACTTT
____________________________________________________________
consensus ACGGNTCTCTGGGTCCTTCCAGGTCNCCTTGCGTCTGGAGCCCTGGNGTTTGACNACTTT
. : . : . : . : . : . :
rJMFF030C23- TTTCTGACNCCATCGATTTCAAAATCTGAGGAGGCGGCTAGGCTGCTCGTGCTGGAGGGT
____________________________________________________________
consensus TTTCTGACNCCATCGATTTCAAAATCTGAGGAGGCGGCTAGGCTGCTCGTGCTGGAGGGT
. : . : . : . : . : . :
rJMFF030C23- GGGTGAGGGGATCTTTCTCGCAATTTACNCAAGCCTCAATGATATAAACNACNCCGCATT
____________________________________________________________
consensus GGGTGAGGGGATCTTTCTCGCAATTTACNCAAGCCTCAATGATATAAACNACNCCGCATT
. : . : . : . : . : . :
rJMFF030C23- CNCCAAACTGCTCGNGCCGCTATTGCTCCTCTTGTTCCTCCGGCAACCGCCGCCAACGGG
JMFF030C23+ TCCGGCAACCGCCGCCAACGGG
____________________________________________________________
consensus CNCCAAACTGCTCGNGCCGCTATTGCTCCTCTTGTTCCTCCGGCAACCGCCGCCAACGGG
. : . : . : . : . : . :
rJMFF030C23- GATGTTAAAAACCANCTTGTCTTGTTTGGCTAGGTTTTGTTTTAGTTGAAGGATATCGTT
JMFF030C23+ GATGTTAAAAACCAGCTTGTCTTGTTTGGCTAGGTTTTGTTTTAGTTGAAGGATATCGTT
____________________________________________________________
consensus GATGTTAAAAACCAGCTTGTCTTGTTTGGCTAGGTTTTGTTTTAGTTGAAGGATATCGTT
. : . : . : . : . : . :
rJMFF030C23- GAGGATCTTTGCTTCAACTTGAGGGTTTTGNGCAAGGAGCAAAAAAAACCGAG
JMFF030C23+ GAGGATCTTTGCTTCAACTTGAGGGTTTTGTGCAAGGAGCAGAAAGAACCGAGTGCCGAA
____________________________________________________________
consensus GAGGATCTTTGCTTCAACTTGAGGGTTTTGTGCAAGGAGCAGAAAGAACCGAGTGCCGAA
. : . : . : . : . : . :
JMFF030C23+ GCCGTGGTGTCTCCTCCGGCGATGATAAATGTCACAAAGATGTCTCTCAGAAACTGCATC
____________________________________________________________
consensus GCCGTGGTGTCTCCTCCGGCGATGATAAATGTCACAAAGATGTCTCTCAGAAACTGCATC
. : . : . : . : . : . :
JMFF030C23+ GAATTTCCTCAGAGGGTTTTGATGTGTGACGTCAGCATGCCGGAGGAATCGTGTGGTTGC
____________________________________________________________
consensus GAATTTCCTCAGAGGGTTTTGATGTGTGACGTCAGCATGCCGGAGGAATCGTGTGGTTGC
. : . : . : . : . : . :
JMFF030C23+ TACTGGGTTTTGTTGAGCTGTTCCGTCATCTCCTCAAGGATGGGATATATAAAGTTACTG
____________________________________________________________
consensus TACTGGGTTTTGTTGAGCTGTTCCGTCATCTCCTCAAGGATGGGATATATAAAGTTACTG
. : . : . : . : . : . :
JMFF030C23+ AAACTTTGATCAGCTTGAGAAAGCTTTTTCTCTCTGTCAATCCCTCCACAAATCCAATAT
____________________________________________________________
consensus AAACTTTGATCAGCTTGAGAAAGCTTTTTCTCTCTGTCAATCCCTCCACAAATCCAATAT
. : . : . : . : . : . :
JMFF030C23+ TTCTGCAGCTTCCAACACATTTCCCGGAGTATATTTCTGTAGAGAATAGCGATCACGCCA
JMSF024F08+ TTCCGGGAGTATCTCTCTGTAGAGAATAGCGTTCACGCCA
____________________________________________________________
consensus TTCTGCAGCTTCCAACACATTTCCGGGAGTATCTTTCTGTAGAGAATAGCGTTCACGCCA
. : . : . : . : . : . :
JMFF030C23+ TCCCTGATCGCCTTCAGGAATGGATGGTCGCCGGTTGGGTCAATGCAAAGACTGCC
JMFF044D05+ CAGGAATGGATGTTCGCCGGTTGGGTCAACGCAAAGAGTGCCGGGA
JMSF024F08+ TCCCTGATCGCCTCCAGGATTGGATGGTCGCCGGTTGGGTCAACGCAAAGACTGCCCAGA
____________________________________________________________
consensus TCCCTGATCGCCTTCAGGAATGGATGGTCGCCGGTTGGGTCAACGCAAAGACTGCCGGGA
. : . : . : . : . : . :
JMFF044D05+ TCCTTGTCCATAAACTGCTGACAGCTTATGTCGAACAAAATTCTATGGAAAATTTCTTGC
JMSF024F08+ TCCTTATCCAGAAACTGCTGAAAGCTTATGTCGAAAGAAATTCTATGGAAAATTTCCTGC
____________________________________________________________
consensus TCCTTGTCCATAAACTGCTGACAGCTTATGTCGAACGAAATTCTATGGAAAATTTCTTGC
. : . : . : . : . : . :
JMFF044D05+ AGATCGATGTGGGTCCCTTGTTGAGCGTAATGGTCAAGAACCGGAAACAACCCATTCTCG
JMSF024F08+ AGATCGACGTGGGTTCCTTGTTGAGCGTAATGTTCAAGAACCGGAAACATCCCATTCTCC
____________________________________________________________
consensus AGATCGATGTGGGTTCCTTGTTGAGCGTAATGTTCAAGAACCGGAAACATCCCATTCTCG
. : . : . : . : . : . :
JMFF044D05+ ATCTTCTGTGACACGTTCCTCTCCAAGGAAGTGCGGAAGTTGGCCTGGTTCATGAGCGGC
JMSF024F08+ ATCTTCTGCGACACGTTCCTCTCCAAGGAAGTGCGGAAGTTGTCATGGTTCATAAGCGGC
____________________________________________________________
consensus ATCTTCTGTGACACGTTCCTCTCCAAGGAAGTGCGGAAGTTGTCCTGGTTCATGAGCGGC
. : . : . : . : . : . :
JMFF044D05+ GTCGTGGTCTTCCGGTGAAGCTCCCATAGCTCAGAGTCCACGTTTATCATCCCATCTCCG
JMSF024F08+ GTCGTGGTCTTCCGGTGAAGCTCCCATAGCTCCGAGTCCACGTTTATCATCCCATC-CCG
____________________________________________________________
consensus GTCGTGGTCTTCCGGTGAAGCTCCCATAGCTCCGAGTCCACGTTTATCATCCCATCTCCG
. : . : . : . : . : . :
JMFF044D05+ AGGACGTGAAATATTTTCCGGAAACCAGGACCCTTCGGATAGTTCTCGAAGTTTCTGCAG
JMSF024F08+ AGGACGTGAAATATTTTCCGGAAACGAGGACCCTTGGGATAGTTCTGGAAGTTTCTGCAG
____________________________________________________________
consensus AGGACGTGAAATATTTTCCGGAAACGAGGACCCTTGGGATAGTTCTGGAAGTTTCTGCAG
. : . : . : . : . : . :
JMFF044D05+ AGGATGTGATTGACGTTCGCAGGGTCGCAGGTGACAAGCATGTCCATGTTAGCAAACCAT
JMSF024F08+ AGGATGTGATTGACGTTAGCAGGGTCGCCGGTGACAAGCATGTCCCTGTTAGCAAACCAT
____________________________________________________________
consensus AGGATGTGATTGACGTTCGCAGGGTCGCCGGTGACAAGCATGTCCCTGTTAGCAAACCAT
. : . : . : . : . : . :
JMFF044D05+ --ACCTTTGATCTCAATTGTCCCACCACTTTCTCGGAGAAGCTCTGTTGCATAATGGTGG
JMSF024F08+ GGACCTTTGATCTCAAATGTCCCACCACTTTCTCGGAGAAGCTCTGTTACATATTCGTGG
____________________________________________________________
consensus GGACCTTTGATCTCAATTGTCCCACCACTTTCTCGGAGAAGCTCTGTTGCATATTGGTGG
. : . : . : . : . : . :
JMFF044D05+ ATGCGGCCGGCGTTTTGTAGGAGCGCCGGCAACATTCCGACGACAGGCCAATTCGTGGGA
JMSF024F08+ ATGCGGCCGGCGTTCTGTAGGAGCGCCGGCAACATTCCGACGACAGGCCAATTCGTGGGA
____________________________________________________________
consensus ATGCGGCCGGCGTTTTGTAGGAGCGCCGGCAACATTCCGACGACAGGCCAATTCGTGGGA
. : . : . : . : . : . :
JMFF044D05+ AGTACGCTTCGGCGGCTGCGTTTCTTCCA
JMSF024F08+ AATACGCTTCGGCGGCTGCGTTTCTTCCAAATCTGCCGCGCCCATATCCAACACAAAATA
____________________________________________________________
consensus AGTACGCTTCGGCGGCTGCGTTTCTTCCAAATCTGCCGCGCCCATATCCAACACAAAATA
. : . : . : . : . : . :
JMSF024F08+ CTACATAAAATAGCCACAACAACATAAGACTCTTTGAAGATTCTCATTGTATATCTGACC
____________________________________________________________
consensus CTACATAAAATAGCCACAACAACATAAGACTCTTTGAAGATTCTCATTGTATATCTGACC