Previous Contig 005843:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN005I03-            GAGAGAACTAGTCTCGAGXXXXXXXXXXXXXXXXXXXXXGATACAACATAAAAGGTATT
                      ____________________________________________________________
consensus              GAGAGAACTAGTCTCGAGNNNNNNNNNNNNNNNNNNNNNGATACAACATAAAAGGTATT
 
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JMFN005I03-           GAATGGTATAATACTAAAATGTTCTACAAGCCTTTGTATTGCATTGTGTCGATTGACAAG
rJMSF019L10-                             TGTTCTACAAGCCTTTGTATTGCATTGTGTCGATTGACAAG
                      ____________________________________________________________
consensus             GAATGGTATAATACTAAAATGTTCTACAAGCCTTTGTATTGCATTGTGTCGATTGACAAG
 
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JMFN005I03-           CAAACATATATACCTGAATTGATATGTAGCACAAACTAACAAAAGAGAAACAAAAATTTT
JMFN036L21+               CATATATACCTGAATGNATATGTAGCACAAACTAACAAAAGAGAAACAAAAATTTT
rJMSF019L10-          CAAACATATATACCTGAATTGATATGTAGCACAAACTAACAAAAGAGAAACAAAAATTTT
                      ____________________________________________________________
consensus             CAAACATATATACCTGAATTGATATGTAGCACAAACTAACAAAAGAGAAACAAAAATTTT
 
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JMFN005I03-           CATGTTTTCAGAGTGGTGTTCTTGATGATGATTCATGAGAAGAGTTTGGTAAAGAAGTTG
JMFN036L21+           CATGTTTTCAGAGTGGTGTTCTTGATGATGATTCATGAGAAGAGTTTGGTAAAGAAGTTG
rJMSF019L10-          CATGTTTTCAGAGTGGTGTTCTTGATGATGATTCATGAGAAGAGTTTGGTAAAGAAGTTG
                      ____________________________________________________________
consensus             CATGTTTTCAGAGTGGTGTTCTTGATGATGATTCATGAGAAGAGTTTGGTAAAGAAGTTG
 
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JMFN005I03-           CCAGAAGTGGCTTTCTTCTCCAGGCATGCAACATGGGCATATCTTCCAAGCTTGTCTACT
JMFN036L21+           CCAGAAGTGGCTTTCTTCTCCAGGCATGCAACATGGGCATATCTTCCAAGCTTGTCTACT
rJMSF019L10-          CCAGAAGTGGCTTTCTTCTCCAGGCATGCAACATGGGCATATCTTCCAAGCTTGTCTACT
JMSF019L10+                                                                 TCTACT
                      ____________________________________________________________
consensus             CCAGAAGTGGCTTTCTTCTCCAGGCATGCAACATGGGCATATCTTCCAAGCTTGTCTACT
 
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JMFN005I03-           TGCCTTGCTTCTCCCTTTGTGTCCTTCTTGCAGATTTTGCATGTCTTGTCAACCCATCCC
JMFN036L21+           TGCCTTGCTTCTCCCTTTGTGTCCTTCTTGCAGATTTTGCATGTCTTGTCAACCCATCCC
rJMSF019L10-          TGCCTTGCTTCTCCCTTTGTGTCCTTCTTGCAGATTTTGCATGTCTTGTCAACCCATCCC
JMSF019L10+           TGCCTTGCTTCTCCCTTTGTGTCCTTCTTGCAGATTTTGCATGTCTTGTCAACCCATCCC
                      ____________________________________________________________
consensus             TGCCTTGCTTCTCCCTTTGTGTCCTTCTTGCAGATTTTGCATGTCTTGTCAACCCATCCC
 
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JMFN005I03-           TCTTCCACATACTGCCCATCCACCTCAACATAAGACTTGAAGAAATCCTTGTATGTTCCT
JMFN036L21+           TCTTCCACATACTGCCCATCCACCTCAACATAAGACTTGAAGAAATCCTTGTATGTTCCT
rJMSF019L10-          TCTTCCACATACTGCCCATCCACCTCAACATAAGACTTGAAGAAATCCTTGTATGTTCCT
JMSF019L10+           TCTTCCACATACTGCCCATCCACCTCAACATAAGACTTGAAGAAATCCTTGTATGTTCCT
                      ____________________________________________________________
consensus             TCTTCCACATACTGCCCATCCACCTCAACATAAGACTTGAAGAAATCCTTGTATGTTCCT
 
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JMFN005I03-           CCAATCTTTCTTCTGAGAGCTCCATACTGTTCTCTGGACATTCTCCCTCCGGATTGAGTT
JMFN036L21+           CCAATCTTTCTTCTGAGAGCTCCATACTGTTCTCTGGAAATTCTCCCTCCGGATTGAGTT
rJMSF019L10-          CCAATCTTTCTTCTGAGAGCTCCATACTGTTCTCTGGACATTCTCCCTCCGGATTGAGTT
JMSF019L10+           CCAATCTTTCTTCTGAGAGCTCCATACTGTTCTCTGGACATTCTCCCTCCGGATTGAGTT
                      ____________________________________________________________
consensus             CCAATCTTTCTTCTGAGAGCTCCATACTGTTCTCTGGACATTCTCCCTCCGGATTGAGTT
 
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JMFN005I03-           GCTTCCCTAGCA                                                
JMFN036L21+           GCTTCCCTAGCATCTTCAAGAAGCTCGGCATCTTTGGCGGATCTAACCTGGGAAAAATCG
rJMSF019L10-          GCTTCCCTAGCATCTTCAAGAAGCTCGGCATCTTTGGCGGATCTAACCTGGGAAAAATCG
JMSF019L10+           GCTTCCCTAGCATCTTCAAGAAGCTCGGCATCTTTGGCGGATCTAACCTGGGAAAAATCG
                      ____________________________________________________________
consensus             GCTTCCCTAGCATCTTCAAGAAGCTCGGCATCTTTGGCGGATCTAACCTGGGAAAAATCG
 
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JMFN036L21+           AGAGCTTCCGTCACACTACTGAACAGAGATTGCTTCCTCTGCGCGGGTTCTTCATCGCTC
rJMSF019L10-          AGAGCTTCCGTCACACTACTGAACAGAGATTGCTTCCTCTGCGCGGGTTCTTCATCGCTC
JMSF019L10+           AGAGCTTCCGTCACACTACTGAACAGAGATTGCTTCCTCTGCGCGGGTTCTTCATCGCTC
                      ____________________________________________________________
consensus             AGAGCTTCCGTCACACTACTGAACAGAGATTGCTTCCTCTGCGCGGGTTCTTCATCGCTC
 
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JMFN036L21+           TTCTCTTTCTTGGCTGAAACCACGAAAGATTTCTTGAGGCTTCTTCTGCTGGGAACGCCG
rJMSF019L10-          TTCTCTTTCTTGGCTGAAACCACGAAAGATTTCTTGAGGCTTCTTCTGCTGGGAACGCCG
JMSF019L10+           TTCTCTTTCTTGGCTGAAACCACGAAAGATTTCTTGAGGCTTCTTCTGCTGGGAACGCCG
                      ____________________________________________________________
consensus             TTCTCTTTCTTGGCTGAAACCACGAAAGATTTCTTGAGGCTTCTTCTGCTGGGAACGCCG
 
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JMFN036L21+           CTACAAGTTGAGAGCTTGTGTGCACACCCAGTGTTTGTGAAAATGCCACTCTGTGGAGGC
rJMSF019L10-          CTACAAGTTGAGAGCTTGTGTGCACACCCAGTGTTTGTGAAAATGCCACTCTGTGGAGGC
JMSF019L10+           CTACAAGTTGAGAGCTTGTGTGCACACCCAGTGTTTGTGAAAATGCCACTCTGTGGAGGC
                      ____________________________________________________________
consensus             CTACAAGTTGAGAGCTTGTGTGCACACCCAGTGTTTGTGAAAATGCCACTCTGTGGAGGC
 
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JMFN036L21+           GTCAAGGTCAGAGCCCTGAGACCCATTTT                               
rJMSF019L10-          GTCAAGGTCAGAGCCCTGAGACCCATTTTTGCTCTGTATAGTTTTCAAGGTTAGTCTTTG
JMSF019L10+           GTCAAGGTCAGAGCCCTGAGACCCATTTTTGCTCTGTATAGTTTTCAAGGTTAGTCTTTG
                      ____________________________________________________________
consensus             GTCAAGGTCAGAGCCCTGAGACCCATTTTTGCTCTGTATAGTTTTCAAGGTTAGTCTTTG
 
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rJMSF019L10-          GTGCCATTTTTGCTGCTTATATATATTGGTGTGAGGAGACGTTCATGA            
JMSF019L10+           GTGCCATTTTTGCTGCTTATATATATTGGTGTGAGGAGACGTTCATGAGGGAGAGTTTTC
                      ____________________________________________________________
consensus             GTGCCATTTTTGCTGCTTATATATATTGGTGTGAGGAGACGTTCATGAGGGAGAGTTTTC