Previous Contig 005736:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B22Sequence453005736 (2)gb:AF009223_17610970.045Pneumocystis carinii kexin-like serine endoprotease mRNA, partial cds.721012002 (2)gb:BT008626_16398374e-43Arabidopsis thaliana clone RAFL09-89-N13 (R19946) unknown protein (At5g65630) mR
JMSF018B23Sequence233005736 (2)732012002 (2)gb:BT008626_16398372e-45Arabidopsis thaliana clone RAFL09-89-N13 (R19946) unknown protein (At5g65630) mR

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF018B22+ GAAGGCCGCGTACTCTCATGATCCATAGGTTGA
                      ____________________________________________________________
consensus GAAGGCCGCGTACTCTCATGATCCATAGGTTGA
 
. : . : . : . : . : . :
JMSF018B22+ GGCCGCGGCGGTGGAGCAGGACCATTGAAGTGACGCTNGAAATGCTTGTTTGAAGTATCA
                      ____________________________________________________________
consensus GGCCGCGGCGGTGGAGCAGGACCATTGAAGTGACGCTNGAAATGCTTGTTTGAAGTATCA
 
. : . : . : . : . : . :
JMSF018B22+ TGGCGGTTGAGATTATTGTGGCCGGGGTTATGGTTGAACCTGTCGCCGGAATGAGGGTTA
                      ____________________________________________________________
consensus TGGCGGTTGAGATTATTGTGGCCGGGGTTATGGTTGAACCTGTCGCCGGAATGAGGGTTA
 
. : . : . : . : . : . :
JMSF018B22+ CTGGTAGGCCTACAGGTAAACTTCGCCCGTTGCACCCTTCCATCGCCCCAGTGCGCTTCA
                      ____________________________________________________________
consensus CTGGTAGGCCTACAGGTAAACTTCGCCCGTTGCACCCTTCCATCGCCCCAGTGCGCTTCA
 
. : . : . : . : . : . :
JMSF018B23+ CGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
JMSF018B22+ TTCCTGCCGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
                      ____________________________________________________________
consensus TTCCTGCCGGCGAAAACAGCCGATGCCATAGAAATAGAGGATTTTTGGAAGCTGTACTCA
 
. : . : . : . : . : . :
JMSF018B23+ AGCGGCCATGNCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
JMSF018B22+ AGCGGCCATGGCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
                      ____________________________________________________________
consensus AGCGGCCATGGCTAATCTCCGGCGAGGAAGCGGAGAGAACTCATGATGAAACTGCCGAAA
 
. : . : . : . : . : . :
JMSF018B23+ AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
JMSF018B22+ AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
                      ____________________________________________________________
consensus AGGTTTTATCTTCGCCGGTCGGAAAAATAACTGAATGGAGGGAATATTTGAAAGTAATGA
 
. : . : . : . : . : . :
JMSF018B23+ ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC
JMSF018B22+ ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC
                      ____________________________________________________________
consensus ATAGGGAGGGAGGGGGCGAGGGTTTCGAGGACCCTCTGTTCGCCGGAGTTTTGAACGATC