Previous Contig 005375:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027O19Sequence318005375 (2)664008820 (3)gb:AY864733_16310831e-63Populus tomentosa auxin influx protein (AUX1) mRNA, complete cds.
JMSF013C03Sequence320005375 (2)790008820 (3)gb:AY864733_16310836e-86Populus tomentosa auxin influx protein (AUX1) mRNA, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF027O19+ GCACAGCTCGCGGTTGGAT
JMSF013C03+ GGCACAGCTCGCGGTNGGAT
                      ____________________________________________________________
consensus GGCACAGCTCGCGGTTGGAT
 
. : . : . : . : . : . :
JMFF027O19+ GGCCGTTACAACTTCTTCTAAGGAGCGCTGTTTCCATTGGGGCTATAAATGCAAGCAAAA
JMSF013C03+ GGCCGTTACAACTTCTTCTAAGGAGCGCTGTTTCCATTGGGGCTATAAATGCAAGCAAAA
                      ____________________________________________________________
consensus GGCCGTTACAACTTCTTCTAAGGAGCGCTGTTTCCATTGGGGCTATAAATGCAAGCAAAA
 
. : . : . : . : . : . :
JMFF027O19+ ACAGTAATATATTATTATCTCTATCTGAATATTCGCAGCTGACGGCGGCAGAGCAATTAT
JMSF013C03+ ACAGTAATATATTATTATCTCTATCTGAATATTCGCAGCTGACGGCGGCAGAGCAATTAT
                      ____________________________________________________________
consensus ACAGTAATATATTATTATCTCTATCTGAATATTCGCAGCTGACGGCGGCAGAGCAATTAT
 
. : . : . : . : . : . :
JMFF027O19+ TATTAAATGTGGGGAGTCTTGAAATCTTGGAGGGGATAAAAAGACGAGATTTTTAAGAGT
JMSF013C03+ TATTAAATGTGGGGAGTCTTGAAATCTTGGAGGGGATAAAAAGACGAGATTTTTAAGAGT
                      ____________________________________________________________
consensus TATTAAATGTGGGGAGTCTTGAAATCTTGGAGGGGATAAAAAGACGAGATTTTTAAGAGT
 
. : . : . : . : . : . :
JMFF027O19+ GCAGAAACGAAACGAAGCGAAAAGGCTGGCTTATTGAATACACTAACGCAGCCCCCCTAG
JMSF013C03+ GCAGAAACGAAACGAAGCGAAAAGGCTGGCTTATTGAATACACTAACGCAGCCCCCCTAG
                      ____________________________________________________________
consensus GCAGAAACGAAACGAAGCGAAAAGGCTGGCTTATTGAATACACTAACGCAGCCCCCCTAG
 
. : . : . : . : . : . :
JMFF027O19+ AGCTAGAGAGAGGGTAGAGAGTAGAGAATCAGAGAGAGAGAGAGAGGTGAGGTGGAATC
JMSF013C03+ AGCTAGAGAGAGGGTAGAGAGTAGAGAATCAGAGAGAGAGAGAGAGGTGAGGTGAAATCC
                      ____________________________________________________________
consensus AGCTAGAGAGAGGGTAGAGAGTAGAGAATCAGAGAGAGAGAGAGAGGTGAGGTGGAATCC