| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF013B11 | Sequence | 501 | 005370 (2) | pir|T51888|T51888 | 7e-26 | asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) [validated] - Arabidops | 727 | 011724 (2) | gb:AF530460_1809077 | 2e-82 | Striga hermonthica asparagine synthetase (AS) mRNA, complete cds. |
| JMSF023A19 | Sequence | 391 | 005370 (2) | pir|T51888|T51888 | 9e-39 | asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4) [validated] - Arabidops | 723 | 011724 (2) | gb:AF530460_1809077 | 3e-81 | Striga hermonthica asparagine synthetase (AS) mRNA, complete cds. |
This contig is upended
. : . : . : . : . : . :
JMSF013B11+ TGAAGCAANCCACACAGACCC
____________________________________________________________
consensus TGAAGCAANCCACACAGACCC
. : . : . : . : . : . :
JMSF013B11+ ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
____________________________________________________________
consensus ATCAAGTCCCCAGCCCATATAAAGTGGCGTAATACCAATAGCATCCCTGGCAGCAATGAA
. : . : . : . : . : . :
JMSF023A19+ CATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
JMSF013B11+ ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
____________________________________________________________
consensus ACATTGACCGTGACAACAATGGTTTTGTCTTCATTGTACAGTGGTTGATCTCCAGAAGTA
. : . : . : . : . : . :
JMSF023A19+ GGATCAATAANTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
JMSF013B11+ GGATCAATAATTGCTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
____________________________________________________________
consensus GGATCAATAATTGGTAATCGTTGATGTGCAAGATAACAATCACCCTGGCAATGCAATCCA
. : . : . : . : . : . :
JMSF023A19+ CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
JMSF013B11+ CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
____________________________________________________________
consensus CTCCAATCGGGTCCTCTATGGCGCAACCTCCTAGAAAGCTCGATGATTCTGGACCGCTTC
. : . : . : . : . : . :
JMSF023A19+ GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
JMSF013B11+ GCCTGAGAGTTGTCTGTGCAACCGAAAACTGCAAGTATTCCACACATGGCGGCGCCTCTC
____________________________________________________________
consensus GCCTGAGAGTTGTCTGTGCAACCGAACACTGCAAGTATTCCACACATGGCGGCGCCTCTC
. : . : . : . : . : . :
JMSF023A19+ TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATACGCTGT
JMSF013B11+ TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
____________________________________________________________
consensus TCTCTCTCTCTCTCTCCCTCTCTCTCTCAAGTTATCTGTACGTGCGTATCTATATGCTGT
. : . : . : . : . : . :
JMSF023A19+ CTGAATAG
JMSF013B11+ CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
____________________________________________________________
consensus CTGAATAGGACCTATGGGAGAGAAGAGATAGGTTGGAATGAAATGGAAGTGGAGGCTGGA
. : . : . : . : . : . :
JMSF013B11+ GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC
____________________________________________________________
consensus GGCTGCTGAGAGCTGAGCCGCCCGCTATGAGCCTTTACAAACTGGTGGCTTGACCCCCCC