| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF029L02 | Sequence | 427 | 005341 (3) | gb:AC123513_1192410 | 7e-26 | Dictyostelium discoideum strain AX4 chromosome 2 map 2779865-2840915, *** SEQUEN | 798 | 008738 (8) | gb:AB022223_1515175 | 4e-98 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23.>gb:AY035004_155 |
| JMFF041N19 | Sequence | 641 | 005341 (3) | gb:AC123513_1192410 | 2e-25 | Dictyostelium discoideum strain AX4 chromosome 2 map 2779865-2840915, *** SEQUEN | 642 | 008738 (8) | gb:AB022223_1515175 | 2e-68 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23.>gb:AY035004_155 |
| JMSF012M06 | Sequence | 465 | 005341 (3) | gb:AC123513_1192410 | 8e-26 | Dictyostelium discoideum strain AX4 chromosome 2 map 2779865-2840915, *** SEQUEN | 773 | 008738 (8) | gb:AB022223_1515175 | 7e-96 | Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23.>gb:AY035004_155 |
This contig is upended
. : . : . : . : . : . :
JMFF041N19+ TACCGCGATAAACCGTGCCATAGGTGCCTTGAGCAATAAGATAC
____________________________________________________________
consensus TACCGCGATAAACCGTGCCATAGGTGCCTTGAGCAATAAGATAC
. : . : . : . : . : . :
JMFF041N19+ CTAATCTCCAATTTCAAAGGATCAATCTCCCAGTCCTCCTTGGGCCTCTGGACTTGATGT
____________________________________________________________
consensus CTAATCTCCAATTTCAAAGGATCAATCTCCCAGTCCTCCTTGGGCCTCTGGACTTGATGT
. : . : . : . : . : . :
JMFF041N19+ TCTACACTCCTAGACCAAACCCGACTCAGATGCTTCTCCAATTGAACATCCAAGCTTTTG
____________________________________________________________
consensus TCTACACTCCTAGACCAAACCCGACTCAGATGCTTCTCCAATTGAACATCCAAGCTTTTG
. : . : . : . : . : . :
JMFF041N19+ AGATCAATCTTATCAGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
JMFF029L02+ GCCATATTT
JMSF012M06+ AGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
____________________________________________________________
consensus AGATCAATCTTATCAGCCCTAAAAATCATATCTTTGCTAGGGCTCTTCCCTGCCATATTT
. : . : . : . : . : . :
JMFF041N19+ CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
JMFF029L02+ CCATCACTAATACTCCCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
JMSF012M06+ CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
____________________________________________________________
consensus CCATCACTAATACT-CCCTGGCCCCTTCAACTTAGACCCTAATTCCCCTTCTGGATGCCC
. : . : . : . : . : . :
JMFF041N19+ TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
JMFF029L02+ TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
JMSF012M06+ TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
____________________________________________________________
consensus TGAATAGTCCCCTTTGGGCACCTCACCACCATCAACACTTGTTCTCAAATCCATATTTAT
. : . : . : . : . : . :
JMFF041N19+ TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
JMFF029L02+ TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
JMSF012M06+ TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
____________________________________________________________
consensus TAAATCAGTCCAACAACCCCCACAAAGGTTCAATCTTTAAAGAATTTTTTTAAGAAGATC
. : . : . : . : . : . :
JMFF041N19+ AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
JMFF029L02+ AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
JMSF012M06+ AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
____________________________________________________________
consensus AAAACAGAAATAAAATCAATGAAAAACAAGCTAATCTTTTTGCTGGAACTCTATCAAATT
. : . : . : . : . : . :
JMFF041N19+ GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
JMFF029L02+ GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
JMSF012M06+ GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
____________________________________________________________
consensus GATCAGAAAAGATCTAAGAACTTATCATCATCATCATCATCAAAGAGAGGTCATCTCAAT
. : . : . : . : . : . :
JMFF041N19+ GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
JMFF029L02+ GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
JMSF012M06+ GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
____________________________________________________________
consensus GATTCTCAATGTGCAGAAAATCTTCAAAAACAAAAAACCTGAGAAATAAACAAAGGAAGT
. : . : . : . : . : . :
JMFF041N19+ CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAA
JMFF029L02+ CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAA
JMSF012M06+ CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAAACCC
____________________________________________________________
consensus CCCAATTCCGACTCGGGCTTGTTTCCCAGTTCTGACCCAGAGCAGAAAAGGGAAAAACCC