Previous Contig 005102:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014O14Sequence581005102 (5)pir|T47595|T475951e-27RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido776008899 (4)pir|T47595|T475952e-71RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido
JMFN036A23Sequence597005102 (5)pir|T47595|T475952e-32RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido
JMSF009E09Sequence491005102 (5)pir|T47595|T475952e-15RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido796008899 (4)pir|T47595|T475951e-72RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido
JMSF009L10Sequence472005102 (5)pir|T47595|T475956e-07RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido764008899 (4)pir|T47595|T475952e-68RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido
JMSF027F19Sequence637005102 (5)pir|T47595|T475953e-36RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido755008899 (4)pir|T47595|T475958e-71RING finger protein T12E18.50 - Arabidopsis thaliana>gb:ATT12E18_1554324 Arabido

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN036A23+ TCCGCATAAT
JMSF027F19+ GTCAGCTTCAATCTTCTCAACATCAGCTCCGCATAAT
                      ____________________________________________________________
consensus GTCAGCTTCAATCTTCTCAACATCAGCTCCGCATAAT
 
. : . : . : . : . : . :
JMFN036A23+ GGACAGTCCTTAAAGCGTGTGATACATACTTTGCAAAATACATGAGAACAAGGCACACAT
JMFF014O14+ CTTAAAGCGTGTGATACATACTTTGCAAAATACATGAGAACAAGGCACACAT
JMSF027F19+ GGACAGTCCTTAAAGCGTGTGATACATACTTTGCAAAATACATGAGAACAAGGCACACAT
                      ____________________________________________________________
consensus GGACAGTCCTTAAAGCGTGTGATACATACTTTGCAAAATACATGAGAACAAGGCACACAT
 
. : . : . : . : . : . :
JMFN036A23+ CGGCTGCAATCATAAAGTAAAGCTTGACATATCATGCAGCTAAGAGGACCGAGCTTAAAT
JMSF009E09+ TCATAAAGTAAAGCTTGACATATCATGCAGCTAAGAGGACCGAGCTTAAAT
JMFF014O14+ CGGCTGCAATCATAAAGTAAAGCTTGACATATCATGCAGCTAAGAGGACCGAGCTTAAAT
JMSF027F19+ CGGCTGCAATCATAAAGTAAAGCTTGACATATCATGCAGCTAAGAGGACCGAGCTTAAAT
                      ____________________________________________________________
consensus CGGCTGCAATCATAAAGTAAAGCTTGACATATCATGCAGCTAAGAGGACCGAGCTTAAAT
 
. : . : . : . : . : . :
JMFN036A23+ GTTTGAGAATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
JMSF009E09+ GTTTGAGAATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
JMFF014O14+ GTTTGAGAATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
JMSF027F19+ GTTTGAGAATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
JMSF009L10+ ATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
                      ____________________________________________________________
consensus GTTTGAGAATCAAATCCAAGGGGACACTTGGGTGACATAACGCCAGGCTTCTCAGACACT
 
. : . : . : . : . : . :
JMFN036A23+ TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
JMSF009E09+ TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
JMFF014O14+ TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
JMSF027F19+ TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
JMSF009L10+ TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
                      ____________________________________________________________
consensus TGCTTAGGCTTGTTTTCACCACCAGCTTCTTGTGTATATCCAAAGGGGCATTTGGATGAC
 
. : . : . : . : . : . :
JMFN036A23+ ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
JMSF009E09+ ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
JMFF014O14+ ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
JMSF027F19+ ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
JMSF009L10+ ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
                      ____________________________________________________________
consensus ACCTTTGCTTGCTCCCCAGATTCCTGATTAGGCTTGATTTCACTGCCAGCTTGCTGTTTA
 
. : . : . : . : . : . :
JMFN036A23+ TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
JMSF009E09+ TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
JMFF014O14+ TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
JMSF027F19+ TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
JMSF009L10+ TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
                      ____________________________________________________________
consensus TGGACAAAAGGGCATTTCGACGGCACCATAGCTGGCTCCCCAGACTCCTGCTTGGGCTTC
 
. : . : . : . : . : . :
JMFN036A23+ TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
JMSF009E09+ TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
JMFF014O14+ TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
JMSF027F19+ TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
JMSF009L10+ TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
                      ____________________________________________________________
consensus TCACTGCCGCCATGCTGTTTACTTTGACTTTCTCCAGGTTTCTTAACAGATGCATCATCA
 
. : . : . : . : . : . :
JMFN036A23+ GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
JMSF009E09+ GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
JMFF014O14+ GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
JMSF027F19+ GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
JMSF009L10+ GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
                      ____________________________________________________________
consensus GGCCGAGCAGCCTTGACAAAAGGGCAAACAGGCGTCATCTTGATCAACAGCCCGTGGCTT
 
. : . : . : . : . : . :
JMFN036A23+ CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
JMSF009E09+ CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
JMFF014O14+ CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
JMSF027F19+ CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
JMSF009L10+ CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
                      ____________________________________________________________
consensus CGACACTGAATTTCAGTAGAGTAGTTTTGGGGAAAATCAATGTTTCAGCATAAAGCCCCT
 
. : . : . : . : . : . :
JMFN036A23+ ATAGGGAATGGTGATTCGTGAGGGGAAGAACCGATAGGTCACAAAGA
JMSF009E09+ ATAGGGAATGGTGATTCGT
JMFF014O14+ ATAGGGAATGGTGATTCGTGAGGGGAAGAACCGATAGGTCACAAAGA
JMSF027F19+ ATAGGGAATGGTGATTCGTGAGGGGAAGAACCGATAGGTCACAAAGATGAAGAAACCAGC
JMSF009L10+ ATAGGGAATGGTGATTCGTGAGGGGAAGAACCGATAGGTCACAAAGATGAAGAAACCAGC
                      ____________________________________________________________
consensus ATAGGGAATGGTGATTCGTGAGGGGAAGAACCGATAGGTCACAAAGATGAAGAAACCAGC