Previous Contig 004679:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF039A22+                                                             TGAGACATAT
                      ____________________________________________________________
consensus                                                               TGAGACATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF039A22+           CAAAGTCANCCACAGATGTTGAGCCATTCGCAACTTCCTCAGAATTTAACGGTCTACATC
                      ____________________________________________________________
consensus             CAAAGTCANCCACAGATGTTGAGCCATTCGCAACTTCCTCAGAATTTAACGGTCTACATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF039A22+           TACAGAAAACCCGAATGTTGCCTTTCAACTCAATTACTTCATTGTAGAGCCGCTTCCTCT
                      ____________________________________________________________
consensus             TACAGAAAACCCGAATGTTGCCTTTCAACTCAATTACTTCATTGTAGAGCCGCTTCCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF039A22+           CTGAGCACTCATCAAGATATCTTTTCTTCAAAACAGCACACTCTTCGTCATATTTCGTCC
                      ____________________________________________________________
consensus             CTGAGCACTCATCAAGATATCTTTTCTTCAAAACAGCACACTCTTCGTCATATTTCGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+                              ACTAAGATCCTTAAGAGCGCAGAAAACTTCAGGACAAGGAA
JMSF039A22+           TAAGAAGTTCATGTTGCACACTAAGATCCTTAAGAGCGCAGAAAACTTCAGGACAAGGAA
                      ____________________________________________________________
consensus             TAAGAAGTTCATGTTGCACACTAAGATCCTTAAGAGCGCAGAAAACTTCAGGACAAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           AAGAATCTCCAGTGATACCCTTCACTTCATCACTTAAAGCTGCATGTTCTTTTCTCAATT
JMSF039A22+           AAGAATCTCCAGTGATACCCTTCACTTCATCACTTAAAGCTGCATGTTCTTTTCTCAATT
                      ____________________________________________________________
consensus             AAGAATCTCCAGTGATACCCTTCACTTCATCACTTAAAGCTGCATGTTCTTTTCTCAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           CATGTACTTTAGTGGACAGGTCTTCAATTTTCTGAAAAATAGGAAGAGTTTGTTCTTGGT
JMSF039A22+           CATGTACTTTAGTGGACAGGTCTTCAATTTTCTGAAAAATAGGAAGAGTTTGTTCTTGGT
JMSF005C02+                                               AAATAGGAAGAGTTTGTTCTTGGT
                      ____________________________________________________________
consensus             CATGTACTTTAGTGGACAGGTCTTCAATTTTCTGAAAAATAGGAAGAGTTTGTTCTTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           ATGAAATTTCTGGGGTGTCACTTGAAACAATACTCTCATCCCCCAAATCAGTGCTCACTT
JMSF039A22+           ATGAAATTTCTGGGGTGTCACTTGAAACAATACTCTCATCCCCCAAATCAGTGCTCACTT
JMSF005C02+           ATGAAATTTCTGGGGTGTCACTTGAAACAATACTCTCATCCCCCAAATCAGTGCTCACTT
                      ____________________________________________________________
consensus             ATGAAATTTCTGGGGTGTCACTTGAAACAATACTCTCATCCCCCAAATCAGTGCTCACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           CTACTGTTTCGGCTTTGTGAATCAACGGCGGCTCGTAATTCTCAACGGAGACGGTCAAAA
JMSF039A22+           CTACTGTTTCGGCTTTGTGAATCAACGGCGGCTCGTAATTCTCAACGGAGACGGTCAAAA
JMSF005C02+           CTACTGTTTCGGCTTTGTGAATCAACGGCGGCTCGTAATTCTCAACGGAGACGGTCAAAA
                      ____________________________________________________________
consensus             CTACTGTTTCGGCTTTGTGAATCAACGGCGGCTCGTAATTCTCAACGGAGACGGTCAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           CTTTACCAAAATCGTCGCAGAGAGTCGCAATAGTTTGATCGTCCATGAGTAGACCACAAT
JMSF039A22+           CTTTACCAAAATCGTCGCAGAGAGTCGCAATAGTTTGATCGTCCATGAGTAGACCACAAT
JMSF005C02+           CTTTACCAAAATCGTCGCAGAGAGTCGCAATAGTTTGATCGTCCATGAGTAGACCACAAT
                      ____________________________________________________________
consensus             CTTTACCAAAATCGTCGCAGAGAGTCGCAATAGTTTGATCGTCCATGAGTAGACCACAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           TATCAGAAATCGGCAAAGAGTACAATGAATTTCAGAGCTCGCAGACCAAATGTAGTGGAG
JMSF039A22+           TATCAGAAATCGGCAAAGAGTACAATGAATTTCAGAGCTCGCAGACCAAATGTAGTGGAG
JMSF005C02+           TATCAGAAATCGGCAAAGAGTACAATGAATTTCAGAGCTCGCAGACCAAATGTAGTGGAG
                      ____________________________________________________________
consensus             TATCAGAAATCGGCAAAGAGTACAATGAATTTCAGAGCTCGCAGACCAAATGTAGTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS076B07+           AAAGGAGAAGAAGACGAA                                          
JMSF039A22+           AAAGGAGAAGAAGACGAAGTTGAAAGCTTGAGAGAGAGAGAGAGAGAGGACTAAACGGCC
JMSF005C02+           AAAGGAGAAGAAGACGAAGTTGAAAGCTTGAGAGAGAGAGAGAGAGAGGACTAAACGGCC
                      ____________________________________________________________
consensus             AAAGGAGAAGAAGACGAAGTTGAAAGCTTGAGAGAGAGAGAGAGAGAGGACTAAACGGCC