Previous Contig 004587:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018N09Sequence594004587 (2)pir|T04509|T045096e-43hypothetical protein F8F16.240 - Arabidopsis thaliana>gb:ATCHRIV75_1547063 Arabi812009088 (3)gb:AP003770_18333278e-72Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P055
JMSF004D07Sequence260004587 (2)pir|T04509|T045099e-29hypothetical protein F8F16.240 - Arabidopsis thaliana>gb:ATCHRIV75_1547063 Arabi189009088 (3)gb:AP003770_18333271e-09Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P055

Alignment

This contig is upended


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JMFF018N09+ ATGGATCCAGCTCTTCACTATAGTCATCCATATCTGCATCTTGCATGTTCCCATTAG
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consensus ATGGATCCAGCTCTTCACTATAGTCATCCATATCTGCATCTTGCATGTTCCCATTAG
 
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JMFF018N09+ AAGTATGCTCATTTAACTGAAGTTGCATCAAAGAATCACTAGCTTCAGCCATGTCTTCTT
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consensus AAGTATGCTCATTTAACTGAAGTTGCATCAAAGAATCACTAGCTTCAGCCATGTCTTCTT
 
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JMFF018N09+ CATCAACCTCTTCCCACTCACTCTCCTCACTCTCCTCACTTTCATCAATATCTTCCTCTA
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consensus CATCAACCTCTTCCCACTCACTCTCCTCACTCTCCTCACTTTCATCAATATCTTCCTCTA
 
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JMFF018N09+ CCTGCTGAGTGGATCTATCCAAAATGGGGCGTTGAAGAGGCCTAATTATAACCCTGTTTT
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consensus CCTGCTGAGTGGATCTATCCAAAATGGGGCGTTGAAGAGGCCTAATTATAACCCTGTTTT
 
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JMFF018N09+ CACCATTATGGTTAGGCTCTTGTGAAGCCTTTAACAGGTGGCTTTTCGATTTCAAGTGCT
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consensus CACCATTATGGTTAGGCTCTTGTGAAGCCTTTAACAGGTGGCTTTTCGATTTCAAGTGCT
 
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JMFF018N09+ GAGAATACGCCTGGGAACTTCGGTACTCTTTCCCACAAACACCACAGGTATAGAGCATGG
JMSF004D07+ ACCACAGGTATAGAGCATGG
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consensus GAGAATACGCCTGGGAACTTCGGTACTCTTTCCCACAAACACCACAGGTATAGAGCATGG
 
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JMFF018N09+ GCGTCTCAGTCAACTTTTTCTTCTCTTCTGCAATAACAGACTGTCTGGCTAGAAAAAGTG
JMSF004D07+ GCGTCTCAGTCAACTTTTTCTTCTCTTCTGCAATAACAGACTGTCTGGCTAGAAAAAGTG
                      ____________________________________________________________
consensus GCGTCTCAGTCAACTTTTTCTTCTCTTCTGCAATAACAGACTGTCTGGCTAGAAAAAGTG
 
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JMFF018N09+ CTTCTGTAACCCCTGGCACTCCTGCAACCTTGCGTTTGAGATTGTATCGGTGCCATTCGG
JMSF004D07+ CTTCTGTAACCCCTGGCACTCCTGCAACCTTGCGTTTGAGATTGTATCGGTGCCATTCGG
                      ____________________________________________________________
consensus CTTCTGTAACCCCTGGCACTCCTGCAACCTTGCGTTTGAGATTGTATCGGTGCCATTCGG
 
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JMFF018N09+ ACTTGTAATGGAGCTTCTGCTCGGCGTCGTCTTTGAATTCTTTGTTGCAGGCGTTGCAGG
JMSF004D07+ ACTTGTAATGGAGCTTCTGCTCGGCGTCGTCTTTGAATTCTTTGTTGCAGGCGTTGCAGG
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consensus ACTTGTAATGGAGCTTCTGCTCGGCGTCGTCTTTGAATTCTTTGTTGCAGGCGTTGCAGG
 
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JMFF018N09+ TTAATCCCGGCATTTCTTCGAAATTGTGGATTGGATTTAGAAATAGAATAGGGTTAC
JMSF004D07+ TTAATCCCGGCATTTCTTCGAAATTGTGGATTGGATTTAGAAATAGAATAGGGTTACACC
                      ____________________________________________________________
consensus TTAATCCCGGCATTTCTTCGAAATTGTGGATTGGATTTAGAAATAGAATAGGGTTACACC