| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031P18 | Sequence | 577 | 004544 (9) | pir|T52392|T52392 | 1e-45 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | 745 | 009696 (7) | pir|T52392|T52392 | 2e-43 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 |
| JMFN007O04 | Sequence | 618 | 004544 (9) | pir|T52392|T52392 | 1e-48 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | |||||
| JMSF003L05 | Sequence | 380 | 004544 (9) | 726 | 009696 (7) | pir|T52392|T52392 | 3e-43 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | |||
| JMSF005D15 | Sequence | 234 | 004544 (9) | ||||||||
| JMSF006G03 | Sequence | 386 | 004544 (9) | pir|T52392|T52392 | 3e-40 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | |||||
| JMSF006G18 | Sequence | 440 | 004544 (9) | pir|T52392|T52392 | 1e-31 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | |||||
| JMSF008F01 | Sequence | 409 | 004544 (9) | pir|T52392|T52392 | 7e-31 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | 804 | 009696 (7) | pir|T52392|T52392 | 5e-47 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 |
| JMSF012L19 | Sequence | 429 | 004544 (9) | pir|T52392|T52392 | 1e-44 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | 724 | 009696 (7) | pir|T52392|T52392 | 1e-41 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 |
| JMSF023D13 | Sequence | 672 | 004544 (9) | pir|T52392|T52392 | 1e-52 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 | 709 | 009696 (7) | pir|T52392|T52392 | 3e-43 | hypothetical protein MMB12.11 [imported] - Arabidopsis thaliana>gb:AY150288_1584 |
This contig is upended
. : . : . : . : . : . :
JMFN007O04+ AGCTTGATTCCATCCCGGTTATCTTCAACTTGCT
JMSF023D13+ CAAATTCAAAGGGAAGAAGCTTGATTCCATCCCGGTTATCTTCAACTTGCT
____________________________________________________________
consensus CAAATTCAAAGGGAAGAAGCTTGATTCCATCCCGGTTATCTTCAACTTGCT
. : . : . : . : . : . :
JMFN007O04+ GATTTGCATCTCCCTTGCCCTCCTCATCCTTGCCTGGATAGTTTGAACGGCTAGCTCTTT
JMFF031P18+ TGGATAGTTTGAACGGCTAGCTCTTT
JMSF023D13+ GATTTGCATCTCCCTTGCCCTCCTCACCCTTGCCTGGATAGTTTGAACGGCTAGCTCTTT
____________________________________________________________
consensus GATTTGCATCTCCCTTGCCCTCCTCATCCTTGCCTGGATAGTTTGAACGGCTAGCTCTTT
. : . : . : . : . : . :
JMFN007O04+ GTGATTGTGAATCTTCTATAGCATACAGGTTTCCCCAGTCTACATTATTGCCTCCAATTC
JMFF031P18+ GTGATTGTGAATCTTCTATAGCATACAGGTTTCCCCAGTCTACATTATTGCCTCCAATTC
JMSF023D13+ GTGATTGTGAATCTTCTATAGCATACAGGTTTCCCCAGTCTACATTATTGCCTCCAATTC
____________________________________________________________
consensus GTGATTGTGAATCTTCTATAGCATACAGGTTTCCCCAGTCTACATTATTGCCTCCAATTC
. : . : . : . : . : . :
JMFN007O04+ CAGTTTCCTGGGACTTGGTAGCCTGGTGGTGGCGCAGGATTCTGCGCTGAAGCTCTTCAA
JMSF012L19+ GGGACTTGGTAGCCTGGTGGTGGCGCAGGATTTTGCGCTGAAGCTCTTCAA
JMSF006G03+ TGCGCTGAAGCTCTTCAA
JMFF031P18+ CAGTTTCCTGGGACTTGGTAGCCTGGTGGTGGCGCAGGATTCTGCGCTGAAGCTCTTCAA
JMSF023D13+ CAGTTTCCTGGGACTTGGTAGCCTGGTGGTGGCGCAGGATTCTGCGCTGAAGCTCTTCAA
____________________________________________________________
consensus CAGTTTCCTGGGACTTGGTAGCCTGGTGGTGGCGCAGGATTCTGCGCTGAAGCTCTTCAA
. : . : . : . : . : . :
JMFN007O04+ CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
JMSF012L19+ CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
JMSF006G03+ CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
JMFF031P18+ CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
JMSF023D13+ CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
JMSF008F01+ AGGAGAAGGACNTCTTGGGCGGTGATTA
JMSF006G18+ GGAGAAGGACCTCTTGGGCGGTGATTA
____________________________________________________________
consensus CAAAAGGGGCAACGGAGGGATCTTTGGCGTTAAGGAGAAGGACCTCTTGGGCGGTGATTA
. : . : . : . : . : . :
JMFN007O04+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMSF012L19+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMSF006G03+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMFF031P18+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMSF023D13+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMSF008F01+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
JMSF006G18+ TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
____________________________________________________________
consensus TGGCCTTGATGTGTTCCAAGTTGATGACGATGGCTCGTTCACGGCCGAGAACGGTGGAGG
. : . : . : . : . : . :
JMFN007O04+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMSF012L19+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMSF006G03+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMFF031P18+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMSF023D13+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMSF008F01+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
JMSF006G18+ GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
____________________________________________________________
consensus GGTAGGAGAGAAGTGGGTCCAGTATACGAAGATCGCGGCCAGGAAGTCCCGTCCGCCGCA
. : . : . : . : . : . :
JMFN007O04+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF012L19+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF006G03+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMFF031P18+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF023D13+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF008F01+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF006G18+ TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
JMSF003L05+ TGTGGAGTCCAGTAGAAGCC
____________________________________________________________
consensus TAATGGCGTGTTTTCCGGCCTCCACCACCTGCGCCTGCCCTGTGGAGTCCAGTAGAAGCC
. : . : . : . : . : . :
JMFN007O04+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF012L19+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF006G03+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMFF031P18+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF023D13+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF008F01+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF006G18+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
JMSF005D15+ GGCGGCGT
JMSF003L05+ ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
____________________________________________________________
consensus ATGACCGGACTCCCGACGCCTTCTTTCGCAGTCCACTCCCAATGCCCGGGACGGCGGCGT
. : . : . : . : . : . :
JMFN007O04+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF012L19+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF006G03+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMFF031P18+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF023D13+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF008F01+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF006G18+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF005D15+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
JMSF003L05+ TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
____________________________________________________________
consensus TGTGCCCGTCGTCGTCGACCGCCGGCGCTGCGTTGACTTTAGTTGGAGGAGGGCCCCTCA
. : . : . : . : . : . :
JMFN007O04+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTA
JMSF012L19+ TCATTACGCGTGTTCGA
JMSF006G03+ TCATTAC
JMFF031P18+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
JMSF023D13+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
JMSF008F01+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
JMSF006G18+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
JMSF005D15+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
JMSF003L05+ TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
____________________________________________________________
consensus TCATTACGCGTGTTCGAGCTTGAGTAGCCTAAATTTGACGTCTAGTAAAGCTTCAAATTC
. : . : . : . : . : . :
JMFF031P18+ CATGGTGCAC
JMSF023D13+ CATGGTGCACAGGAATCAAC
JMSF008F01+ CATGGTGCACAGGAATCAAC
JMSF006G18+ CATGGTGCACAGGAATCAACGAATCTCTCTACATGGCTACTTTCACACCAAT
JMSF005D15+ CATGGTGCACAGGAATCAACGAATCTCTCTACATGGCTACTTTCACACCAATAAGGAAAA
JMSF003L05+ CATGGTGCACAGGAATCAACGAATCTCTCTACATGGCTACTTTCACACCAATAAGGAAAA
____________________________________________________________
consensus CATGGTGCACAGGAATCAACGAATCTCTCTACATGGCTACTTTCACACCAATAAGGAAAA
. : . : . : . : . : . :
JMSF005D15+ TAATTTACCACAAAAAATATTCGAAGCATCTATCGTTTTCAATTT
JMSF003L05+ TAATTTACCACAAAAAATATTCGAAGCATCTATCGTTTTCAATTTACTTTGTCGGCAGTG
____________________________________________________________
consensus TAATTTACCACAAAAAATATTCGAAGCATCTATCGTTTTCAATTTACTTTGTCGGCAGTG
. : . : . : . : . : . :
JMSF003L05+ TCATGCCTGGCTTTTACCTCTTGTAGGTGATTTTCTCTCTAGTTATTTGTTCAAGTTGTC
____________________________________________________________
consensus TCATGCCTGGCTTTTACCTCTTGTAGGTGATTTTCTCTCTAGTTATTTGTTCAAGTTGTC