Previous Contig 004474:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003B14Sequence272004474 (2)668012399 (3)
JMSF025D08Sequence650004474 (2)pir|T47663|T476633e-05hypothetical protein T26I12.120 - Arabidopsis thaliana>gb:ATT26I12_1555481 Arabi681012399 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF025D08+ CNAAAAAAAAAGAAGTCAACATGTAGATGTAAATAGCAAGGTACCTAGAT
                      ____________________________________________________________
consensus CNAAAAAAAAAGAAGTCAACATGTAGATGTAAATAGCAAGGTACCTAGAT
 
. : . : . : . : . : . :
JMSF025D08+ TTGGAATCAGAGATACTTGGGTGAGATATTGGTGAAAGAAGCCTTTGTTCTCTTTTTGTA
                      ____________________________________________________________
consensus TTGGAATCAGAGATACTTGGGTGAGATATTGGTGAAAGAAGCCTTTGTTCTCTTTTTGTA
 
. : . : . : . : . : . :
JMSF025D08+ GCTCCCTCCACACTACAAAAGTTTTCATTTTTGTTTTCAAAATCCTTTTACATAATATAA
                      ____________________________________________________________
consensus GCTCCCTCCACACTACAAAAGTTTTCATTTTTGTTTTCAAAATCCTTTTACATAATATAA
 
. : . : . : . : . : . :
JMSF025D08+ CCTTTGATTTTATGTATGCATGTGTATAGATGATGGGAAATACTATAATGTTGCAGTAAA
                      ____________________________________________________________
consensus CCTTTGATTTTATGTATGCATGTGTATAGATGATGGGAAATACTATAATGTTGCAGTAAA
 
. : . : . : . : . : . :
JMSF025D08+ ACACAATTCTAGCGAGCAGCTATATAAATATATATGTTGTACGTAGTGTGTGGGTGTATA
                      ____________________________________________________________
consensus ACACAATTCTAGCGAGCAGCTATATAAATATATATGTTGTACGTAGTGTGTGGGTGTATA
 
. : . : . : . : . : . :
JMSF025D08+ TATATTTCATATTTGTGTACCGTACCGGTGAGCGTGACGAGTGGGCGGATTCTGGCGTGC
                      ____________________________________________________________
consensus TATATTTCATATTTGTGTACCGTACCGGTGAGCGTGACGAGTGGGCGGATTCTGGCGTGC
 
. : . : . : . : . : . :
JMSF025D08+ CTAGCGAGAGCTTTAATGCATTGTTCTCGGTCCATATGAAGGAGCAAACACCTCTCTATT
JMSF003B14+ GGTCCATATGAAGGAGCAANCACCTCTCTATT
                      ____________________________________________________________
consensus CTAGCGAGAGCTTTAATGCATTGTTCTCGGTCCATATGAAGGAGCAAACACCTCTCTATT
 
. : . : . : . : . : . :
JMSF025D08+ AGACTTTGAACCTGTAAAACCAATTGTGTACATGATAATAAGTTCGTTCAATTCCATGCT
JMSF003B14+ AGACTTTGAACCTGTAAAACCAATTGTGTACATGATAATAAGTTCGTTCAATTCCATGCT
                      ____________________________________________________________
consensus AGACTTTGAACCTGTAAAACCAATTGTGTACATGATAATAAGTTCGTTCAATTCCATGCT
 
. : . : . : . : . : . :
JMSF025D08+ AGCTAGAATTTGAGTTTTTATGATTTTAGTCTAACTATACTAGCAAAATGAGATCAAAGG
JMSF003B14+ AGCTAGAATTTGAGTTTTTATGATTTTAGTCTAACTATACTAGCAAAATGAGATCAAAGG
                      ____________________________________________________________
consensus AGCTAGAATTTGAGTTTTTATGATTTTAGTCTAACTATACTAGCAAAATGAGATCAAAGG
 
. : . : . : . : . : . :
JMSF025D08+ ATAAATAGATAGAATTAGGAGAGAGACTAGTGCATATATGTGTATGTAGATCAAAGTACC
JMSF003B14+ ATAAATAGATAGAATTAGGAGAGAGACTAGTGCATATATGTGTATGTAGATCAAAGTACC
                      ____________________________________________________________
consensus ATAAATAGATAGAATTAGGAGAGAGACTAGTGCATATATGTGTATGTAGATCAAAGTACC
 
. : . : . : . : . : . :
JMSF025D08+ TAGCTAAGCTAGCTACTACTTACCATTCTGATATAGCTATGAGGGTGGCAATGCAAAACC
JMSF003B14+ TAGCTAAGCTAGCTACTACTTACCATTCTGATATAGCTATGAGGGTGGCAATGCAAAACC
                      ____________________________________________________________
consensus TAGCTAAGCTAGCTACTACTTACCATTCTGATATAGCTATGAGGGTGGCAATGCAAAACC