Previous Contig 004320:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS143B05Sequence619004320 (2)
JMSF001G22Sequence290004320 (2)825021975gb:AE005172_8908557e-18Arabidopsis thaliana chromosome 1, top arm complete sequence.>gb:AC068602_154038

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS143B05+ CAACCCATC
                      ____________________________________________________________
consensus CAACCCATC
 
. : . : . : . : . : . :
JMFS143B05+ CTCCTCTTCCTNTTCCTCGCCCCCATTCATCTTCTCATCCTCATATTCCTCCTCCTCATC
                      ____________________________________________________________
consensus CTCCTCTTCCTNTTCCTCGCCCCCATTCATCTTCTCATCCTCATATTCCTCCTCCTCATC
 
. : . : . : . : . : . :
JMFS143B05+ CTCCTCCTCCNTGAGCAGCCTAGCAGCCAACCTCTCCTTCCTAGCTGAAGTCTTCTTCTT
                      ____________________________________________________________
consensus CTCCTCCTCCNTGAGCAGCCTAGCAGCCAACCTCTCCTTCCTAGCTGAAGTCTTCTTCTT
 
. : . : . : . : . : . :
JMFS143B05+ ACGCTGCCTCACTGCGGCCTCCGCCTCGGCAGCAGCAGCCGCCTGCAGCCTCGCGGCAGC
                      ____________________________________________________________
consensus ACGCTGCCTCACTGCGGCCTCCGCCTCGGCAGCAGCAGCCGCCTGCAGCCTCGCGGCAGC
 
. : . : . : . : . : . :
JMFS143B05+ GCGTTTCGTGCACTCCCTCGCCGGCCTCTCTCTCCTAACTACAAAATTGTTGTTACTACA
                      ____________________________________________________________
consensus GCGTTTCGTGCACTCCCTCGCCGGCCTCTCTCTCCTAACTACAAAATTGTTGTTACTACA
 
. : . : . : . : . : . :
JMFS143B05+ GTCACTGTTCCGTTTACTTAGCTTGCTATTACTGTGGTTACTGTTAGCAGTCTTGTCACC
                      ____________________________________________________________
consensus GTCACTGTTCCGTTTACTTAGCTTGCTATTACTGTGGTTACTGTTAGCAGTCTTGTCACC
 
. : . : . : . : . : . :
JMFS143B05+ GGGATTCTGTTGGATCGGGGATGAACCGGACATGGCGAGATCAGAGAGGGGATTGTCTAC
                      ____________________________________________________________
consensus GGGATTCTGTTGGATCGGGGATGAACCGGACATGGCGAGATCAGAGAGGGGATTGTCTAC
 
. : . : . : . : . : . :
JMFS143B05+ GGAGGGTTTAGCAGAGAGATCATGAGGTCGCATTGAGAAAAGAAGGACTCTTTTCTATTG
                      ____________________________________________________________
consensus GGAGGGTTTAGCAGAGAGATCATGAGGTCGCATTGAGAAAAGAAGGACTCTTTTCTATTG
 
. : . : . : . : . : . :
JMFS143B05+ CAAGAACAAGAAACAGAGCTTTTTCGGCAAAGGGTTTCAGAAATTATCGCGAAAATTTGT
                      ____________________________________________________________
consensus CAAGAACAAGAAACAGAGCTTTTTCGGCAAAGGGTTTCAGAAATTATCGCGAAAATTTGT
 
. : . : . : . : . : . :
JMFS143B05+ AATTTGTAATAAAATAAAAATAAAAAATATTGCTGTTAATACTCCTTATTTTATGAGTAG
JMSF001G22+ AAAATAAAAATAAAAAATATTGCTGTTAATACTCCCTATTTTATGAGTAG
                      ____________________________________________________________
consensus AATTTGTAATAAAATAAAAATAAAAAATATTGCTGTTAATACTCCTTATTTTATGAGTAG
 
. : . : . : . : . : . :
JMFS143B05+ GGTAAAACTGCAGAAATACATTAAGATTTAAGACAACATCATTCGATAATACGAAACATG
JMSF001G22+ GGTAAAACTGCAGAAATACACTAAGATTTAAGACANCATCNTTCGATAATACGAAACANG
                      ____________________________________________________________
consensus GGTAAAACTGCAGAAATACATTAAGATTTAAGACAACATCATTCGATAATACGAAACATG
 
. : . : . : . : . : . :
JMFS143B05+ GATACTATAA
JMSF001G22+ GATACTATAATTCTGATAAATTTTTAAAAATAAATAATAAAAAACGAAGTTCAGCAGGTT
                      ____________________________________________________________
consensus GATACTATAATTCTGATAAATTTTTAAAAATAAATAATAAAAAACGAAGTTCAGCAGGTT
 
. : . : . : . : . : . :
JMSF001G22+ TCTAGTGGGTGTTACACTGTTCTTGGGGTTTTGGACTTTTGGGGCAAAACTGCAAAAGAG
                      ____________________________________________________________
consensus TCTAGTGGGTGTTACACTGTTCTTGGGGTTTTGGACTTTTGGGGCAAAACTGCAAAAGAG
 
. : . : . : . : . : . :
JMSF001G22+ ACACTGGATTTTCTTGAAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATC
                      ____________________________________________________________
consensus ACACTGGATTTTCTTGAAGAGACAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATC