Previous Contig 004178:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF033B22-                 GATGGCTTCTAAATCTTACAATTGCACACATACACTAAAGAAAGCAATGAAAT
                      ____________________________________________________________
consensus                    GATGGCTTCTAAATCTTACAATTGCACACATACACTAAAGAAAGCAATGAAAT
 
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rJMSF033B22-          TAAGCAGGCAAGTGAAGCTACTCACAGATAATTAATCAAAATCATGTCATTGATGGAATA
                      ____________________________________________________________
consensus             TAAGCAGGCAAGTGAAGCTACTCACAGATAATTAATCAAAATCATGTCATTGATGGAATA
 
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rJMSF033B22-          AGGAAGACTTCCGCTTAAATTATTATATGCAAGATTCCGTAAGCCAGGTGGTTAACCATT
                      ____________________________________________________________
consensus             AGGAAGACTTCCGCTTAAATTATTATATGCAAGATTCCGTAAGCCAGGTGGTTAACCATT
 
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rJMSF033B22-          GGACCATAAGAGAGTTTAGGTGATGGGAAGAGATCTGTCCCACGGGATGTATCACAATAT
JMSF033B22+                                                      GGGATGTATCACAATAT
                      ____________________________________________________________
consensus             GGACCATAAGAGAGTTTAGGTGATGGGAAGAGATCTGTCCCACGGGATGTATCACAATAT
 
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rJMSF033B22-          GAGAACGATAGGGGAGAATCAACAGGTGATTTCCATGTCCCTAGCGCAGAAAATTCAGAT
JMSF033B22+           GAGAACGATAGGGGAGAATCAACAGGTGATTTCCATGTCCCTAGCGCAGAAAATTCAGAT
                      ____________________________________________________________
consensus             GAGAACGATAGGGGAGAATCAACAGGTGATTTCCATGTCCCTAGCGCAGAAAATTCAGAT
 
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rJMSF033B22-          ACCGATGGACGTAAATTTGCTGGGTGTGCACGCTTGTTCCTTTGTGGAGGCTGGAGCGTT
JMSF033B22+           ACCGATGGACGTAAATTTGCTGGGTGTGCACGCTTGTTCCTTTGTGGAGGCTGGAGCGTT
                      ____________________________________________________________
consensus             ACCGATGGACGTAAATTTGCTGGGTGTGCACGCTTGTTCCTTTGTGGAGGCTGGAGCGTT
 
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rJMSF033B22-          TGAGGTGTCGAAGTGACAAGTGCTTCTATCTCCCATGGTGAAACCCGTAACTCTTTCAGC
JMSF033B22+           TGAGGTGTCGAAGTGACAAGTGCTTCTATCTCCCATGGTGAAACCCGTAACTCTTTCAGC
                      ____________________________________________________________
consensus             TGAGGTGTCGAAGTGACAAGTGCTTCTATCTCCCATGGTGAAACCCGTAACTCTTTCAGC
 
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rJMSF033B22-          ATATAATGGATTGCCAGCAAGGGTTCTGATTCTACCATTTGTTTGTGGTAGGCTTTCTGT
JMFF037K03+                        CCAGCAAGGGTTCTGATTCTACCATTTGTTTGTGGTATGCTTTCTGT
JMFF036E20+                        CCAGCAAGGGTTCTGATTCTACCATTTGTTTGTGGTATGCTTTCTGT
JMSF033B22+           ATATAATGGATTGCCAGCAAGGGTTCTGATTCTACCATTTGTTTGTGGTAGGCTTTCTGT
                      ____________________________________________________________
consensus             ATATAATGGATTGCCAGCAAGGGTTCTGATTCTACCATTTGTTTGTGGTAGGCTTTCTGT
 
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rJMSF033B22-          TAGTGAACCGTTAGATTTCTGGGATGAACCATTAGCACTCTGAGAAACATGGAGCCTTCC
JMFF037K03+           TAGTGAACCGTTAGATTTCTAGGATGAACCATTAGCACTCTGAGAAACATGGAGCCTTCC
JMFF036E20+           TAGTGAACCGTTAGATTTCTAGGATGAACCATTAGCACTCTGAGAAACATGGAGCCTTCC
JMSF033B22+           TAGTGAACCGTTAGATTTCTGGGATGAACCATTAGCACTCTGAGAAACATGGAGCCTTCC
                      ____________________________________________________________
consensus             TAGTGAACCGTTAGATTTCTGGGATGAACCATTAGCACTCTGAGAAACATGGAGCCTTCC
 
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rJMSF033B22-          TCTATCGCCGTCGAAATGATGCATGTATGGCTTTCCTGGTTTCAATTCAACTC-CTTTTT
JMFF037K03+           TCTATCGCCGTCGAAATGATGAGTGTATGGCTTTCCTGGTTTCAATTCAACTC-TTTTTT
JMFF036E20+           TCTATCGCCGTCGAAATGATGAGTGTATGGCTTTCCTGGTTTCAATTCAACTCTTTTTTT
JMSF033B22+           TCTATCGCCGTCGAAATGATGCATGTATGGCTTTCCTGGTTTCAATTCAACTC-CTTTTT
                      ____________________________________________________________
consensus             TCTATCGCCGTCGAAATGATGCATGTATGGCTTTCCTGGTTTCAATTCAACTC-CTTTTT
 
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rJMSF033B22-          GGAGAGCGTACA                                                
JMFF037K03+           GGAGAGCGTACA                                                
JMFF036E20+           GGAGAGCGTACA                                                
JMSF033B22+           GGAGAGCGTACAGCGGCGTCCGTACTGCGATGGCGAGCTGAGCTTGTAGAGCGGAGGCGT
                      ____________________________________________________________
consensus             GGAGAGCGTACAGCGGCGTCCGTACTGCGATGGCGAGCTGAGCTTGTAGAGCGGAGGCGT
 
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JMSF033B22+           CGCGGCGGCGACCTTGGGCGGCAGTGGCGGGGACGTCGATCGGCAGTGGCGGGGACGTAG
                      ____________________________________________________________
consensus             CGCGGCGGCGACCTTGGGCGGCAGTGGCGGGGACGTCGATCGGCAGTGGCGGGGACGTAG
 
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JMSF033B22+           ATCGGCGATGGAAGACGGAATGGTGATGGACGGGAAGATGGAGAGCGTGGACGGCGAGGA
JMFS157D02-                                   GATGGACGGGAAGATGGAGAGCGTGGACGGCGGGGA
                      ____________________________________________________________
consensus             ATCGGCGATGGAAGACGGAATGGTGATGGACGGGAAGATGGAGAGCGTGGACGGCGGGGA
 
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JMSF033B22+           TGATGGAGACTGATGGACGGCGTCGGACGGCGGAGACTGATGGACGGCGTCGGA      
JMFS157D02-           CGATGGAGAGTG-TGGACGGCGTCGGACGGCGGTGACTGATGGACGGCGTCGGAGCAGAG
                      ____________________________________________________________
consensus             TGATGGAGAGTGATGGACGGCGTCGGACGGCGGTGACTGATGGACGGCGTCGGAGCAGAG
 
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JMFS157D02-           CTGATGGAGATGGACGGCGTCAGACGCGATCTGATACAGAGCTGAATGATACAGATCGAG
                      ____________________________________________________________
consensus             CTGATGGAGATGGACGGCGTCAGACGCGATCTGATACAGAGCTGAATGATACAGATCGAG
 
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JMFS157D02-           CTAGGGATTTAGGATAAAAAAAAATCGCGTCCAAAGTGGCCACTTTGGACGCGATTGATT
                      ____________________________________________________________
consensus             CTAGGGATTTAGGATAAAAAAAAATCGCGTCCAAAGTGGCCACTTTGGACGCGATTGATT
 
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JMFS157D02-           AATATTCGCGTCCAAAGTACTGAGATTTGGACGCGAATAATAGAAGACTTTTAGTATTGG
                      ____________________________________________________________
consensus             AATATTCGCGTCCAAAGTACTGAGATTTGGACGCGAATAATAGAAGACTTTTAGTATTGG
 
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JMFS157D02-           CGTCCAAAGTACAGAGATTTGGACGCCAATACTGTTTTAAAATTAAAAAAAAAAAATTAT
                      ____________________________________________________________
consensus             CGTCCAAAGTACAGAGATTTGGACGCCAATACTGTTTTAAAATTAAAAAAAAAAAATTAT
 
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JMFS157D02-           TTATATAGTGGCATTTTAATTACAAAAATGCCACCGCATTACACTTTANGCATCCAAAGT
                      ____________________________________________________________
consensus             TTATATAGTGGCATTTTAATTACAAAAATGCCACCGCATTACACTTTANGCATCCAAAGT