Previous Contig 003639:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS090D10Sequence627003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173
JMFS096C06Sequence609003639 (10)pir|D96563|D965637e-07probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173
JMFS119D12Sequence618003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173
JMFS168D12Sequence553003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173
JMSF022C05Sequence606003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173766013025 (6)gb:AY052306_15626791e-62Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds.>gb:BT000616_1634894 A
JMSF023H22Sequence580003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173803013025 (6)gb:AY052306_15626792e-66Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds.>gb:BT000616_1634894 A
JMSF036C22Sequence633003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173682013025 (6)pir|D96563|D965631e-37probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173
JMSF038G05Sequence628003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173944013025 (6)gb:AY052306_15626794e-81Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds.>gb:BT000616_1634894 A
JMSF043J02Sequence756003639 (10)pir|D96563|D965632e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173810013025 (6)gb:AY052306_15626791e-70Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds.>gb:BT000616_1634894 A
JMSF052I12Sequence612003639 (10)pir|D96563|D965631e-10probable bZIP protein, 48652-45869 [imported] - Arabidopsis thaliana>gb:AE005173936013025 (6)gb:AY052306_15626793e-83Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds.>gb:BT000616_1634894 A

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043J02+ CCCAGGAGAAAAAATTCCCAGTTATCATGGAGCGGAGGCGACG
                      ____________________________________________________________
consensus CCCAGGAGAAAAAATTCCCAGTTATCATGGAGCGGAGGCGACG
 
. : . : . : . : . : . :
JMSF043J02+ GTGGCGGCATTGGAATACTTTGCGGCGGCGTCCGCGGTGGCGAAGGCGGCGGCAGGTCCA
                      ____________________________________________________________
consensus GTGGCGGCATTGGAATACTTTGCGGCGGCGTCCGCGGTGGCGAAGGCGGCGGCAGGTCCA
 
. : . : . : . : . : . :
JMFS119D12+ ACCGCCACTACTTTTACTACTCCGATGCTTCAGTCCATGAA
JMSF043J02+ CTCTGCCCCCAATTCCACCACCGCCACTACTTTTACTACTCCGATGCTTCAGTCCATGAA
JMSF038G05+ CCGATGCTTCAGTCCATGAA
JMSF036C22+ CCGATGCTTCAGTCCATGAA
JMFS090D10+ TCCATGAA
                      ____________________________________________________________
consensus CTCTGCCCCCAATTCCACCACCGCCACTACTTTTACTACTCCGATGCTTCAGTCCATGAA
 
. : . : . : . : . : . :
JMFS119D12+ CACTTTCATCCTCAATATCCTCCTCCGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF043J02+ CACTTTCATCCTCAATATCCTCCTCCGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF038G05+ CACTTTCATCCTCAATATCCTCCTCCGTCTCNTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF036C22+ CACTTTCATCCTCAATATCCTCCTCCGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF023H22+ GTCTCCTCAATAATCGGGTCTTCGTGCTTCCAAG
JMFS168D12+ ATCGGGTCTTCGTGCTT-CAAG
JMFS090D10+ CACTTTCATCCTCAATATCCTCCTCCGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF022C05+ CGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
JMSF052I12+ CGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
                      ____________________________________________________________
consensus CACTTTCATCCTCAATATCCTCCTCCGTCTCCTCAATAATCGGGTCTTCGTGCTT-CAAG
 
. : . : . : . : . : . :
JMFS119D12+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF043J02+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF038G05+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF036C22+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF023H22+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMFS168D12+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMFS090D10+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF022C05+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
JMSF052I12+ TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
                      ____________________________________________________________
consensus TCGGGCGTGGGTATGGAGATCTCTGGCATGGTGGCGGCGCGCTGCAGAGGAGACGGCGTG
 
. : . : . : . : . : . :
JMFS119D12+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF043J02+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF038G05+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF036C22+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF023H22+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMFS168D12+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMFS090D10+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF022C05+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
JMSF052I12+ AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
                      ____________________________________________________________
consensus AAGAAAGGAAGAGGTGGGGGAGGGGGCAGGTCATAGTTGGAAGTCATAGAAGGCGGGATT
 
. : . : . : . : . : . :
JMFS119D12+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF043J02+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF038G05+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF036C22+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF023H22+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMFS168D12+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMFS090D10+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF022C05+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
JMSF052I12+ CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
                      ____________________________________________________________
consensus CCCACGGAGCTTCCGGGAACGGAGGAAGATCCGGAAGTGGAGGCGGCGGCAGCAGCAGCA
 
. : . : . : . : . : . :
JMFS119D12+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF043J02+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF038G05+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF036C22+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF023H22+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMFS168D12+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMFS090D10+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF022C05+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMSF052I12+ GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
JMFS096C06+ GCAGCGCCA
                      ____________________________________________________________
consensus GCAGCAGAAGCAGAAGTGAATTGAGCTTCACCTTCTGCGTAATCATGGAGGGCAGCGCCA
 
. : . : . : . : . : . :
JMFS119D12+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF043J02+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF038G05+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF036C22+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF023H22+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMFS168D12+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMFS090D10+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF022C05+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMSF052I12+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
JMFS096C06+ GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
                      ____________________________________________________________
consensus GTATTCTTCAAGGAAACAGCGTAGCTGGAGTGGGCCGCCGCAAAAGCGTTCCGCGCCGCC
 
. : . : . : . : . : . :
JMFS119D12+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF043J02+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF038G05+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF036C22+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF023H22+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMFS168D12+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMFS090D10+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF022C05+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMSF052I12+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
JMFS096C06+ ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
                      ____________________________________________________________
consensus ACCGCCTCCTTCATGAACATCTTCCGCTCCTTGCATCTGGCCACCGTCTCTTCGTTCTCG
 
. : . : . : . : . : . :
JMFS119D12+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF043J02+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF038G05+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF036C22+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF023H22+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMFS168D12+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMFS090D10+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF022C05+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMSF052I12+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
JMFS096C06+ ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
                      ____________________________________________________________
consensus ATCTTCGATTGCGTACACCCCATCGGAACCCCGACCTAATACATAAACCTCTCTACTACA
 
. : . : . : . : . : . :
JMFS119D12+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF043J02+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF038G05+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF036C22+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF023H22+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMFS168D12+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMFS090D10+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF022C05+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMSF052I12+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
JMFS096C06+ TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
                      ____________________________________________________________
consensus TATATTTACACATACAGACACAGAAAACAGAACGTCTAAGATTTGATCAAACTGAAATCT
 
. : . : . : . : . : . :
JMFS119D12+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAG
JMSF043J02+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGAT
JMSF038G05+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMSF036C22+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMSF023H22+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMFS168D12+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGAT
JMFS090D10+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMSF022C05+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMSF052I12+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
JMFS096C06+ GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
                      ____________________________________________________________
consensus GTTCCAGAATTGACGAGAACAGGGCGGAGGGGAAGGAGAAAAAAGAAGAGATTGAGAGAG
 
. : . : . : . : . : . :
JMSF038G05+ AAATCAG
JMSF036C22+ AAATCAGAATATT
JMSF023H22+ AAATC
JMFS090D10+ AAATCAGAATATTAGAAAGA
JMSF022C05+ AAATCAGAATATTAGAAAGACTCACTCTGCT
JMSF052I12+ AAATCAGAATATTAGAAAGACTCACTCTGCT
JMFS096C06+ AAATCAGAATATTAGAAAGACTCACTCTGCTACTTTTACTTTTGTCTGGAGACCAGACCA
                      ____________________________________________________________
consensus AAATCAGAATATTAGAAAGACTCACTCTGCTACTTTTACTTTTGTCTGGAGACCAGACCA
 
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JMFS096C06+ AAAACAACAGTGAAGGGGAAGCCGGTTAGCCGGATATTTCCCATCTATAACGGCGTCGTT
                      ____________________________________________________________
consensus AAAACAACAGTGAAGGGGAAGCCGGTTAGCCGGATATTTCCCATCTATAACGGCGTCGTT
 
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JMFS096C06+ TTATTATAATTAACTAACAATCTTCTTCATAATAATACTTATAATTGATATCATCAGATT
                      ____________________________________________________________
consensus TTATTATAATTAACTAACAATCTTCTTCATAATAATACTTATAATTGATATCATCAGATT
 
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JMFS096C06+ CCGTTTTCTATGCTTAATTCAATAACAATTACTGTTTTATCACAGTTGCTATTTTACTAC
                      ____________________________________________________________
consensus CCGTTTTCTATGCTTAATTCAATAACAATTACTGTTTTATCACAGTTGCTATTTTACTAC
 
. : . : . : . : . : . :
JMFS096C06+ ACCATACTTATTAAACAACAAATATTAATTACATCGTATGTGTCCCGACCGACACCTAAC
                      ____________________________________________________________
consensus ACCATACTTATTAAACAACAAATATTAATTACATCGTATGTGTCCCGACCGACACCTAAC