clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS063F12 | Sequence | 636 | 003385 (4) | gb:AC149287_1744889 | 4e-49 | Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence. | |||||
JMFS070C02 | Sequence | 636 | 003385 (4) | gb:AC149287_1744889 | 4e-49 | Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence. | |||||
JMSF048H01 | Sequence | 648 | 003385 (4) | gb:AC149287_1744889 | 3e-57 | Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence. | 794 | 003385 (4) | gb:AC151802_1745111 | 2e-50 | Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete sequence. |
This contig is upended
. : . : . : . : . : . :
rJMSF048H01- TTGGGATTGTAGTGTTCAAATTAACACCAATAGTAGG
____________________________________________________________
consensus TTGGGATTGTAGTGTTCAAATTAACACCAATAGTAGG
. : . : . : . : . : . :
rJMSF048H01- TAAAATATTTTACAACTTAACATGCTTAGCAAAGCTCAGAGCTTGAATAACACAGCTATA
____________________________________________________________
consensus TAAAATATTTTACAACTTAACATGCTTAGCAAAGCTCAGAGCTTGAATAACACAGCTATA
. : . : . : . : . : . :
rJMSF048H01- CAAAACATTGAAAAATGGCATATTTTCTCTTTGCTTATTACCCAATCAGAAAAGAACATT
____________________________________________________________
consensus CAAAACATTGAAAAATGGCATATTTTCTCTTTGCTTATTACCCAATCAGAAAAGAACATT
. : . : . : . : . : . :
rJMSF048H01- ATTGCCTCCCCACTCCCCAGTAACCTGTCAACTTCACAGCTCTAACAAAGCTCTTGTAGC
____________________________________________________________
consensus ATTGCCTCCCCACTCCCCAGTAACCTGTCAACTTCACAGCTCTAACAAAGCTCTTGTAGC
. : . : . : . : . : . :
rJMSF048H01- CATTTCTCCTTGAAGTACTCCCGAAAAAACGTAAAGCCCTAAAATACTAAATGTCTATAA
____________________________________________________________
consensus CATTTCTCCTTGAAGTACTCCCGAAAAAACGTAAAGCCCTAAAATACTAAATGTCTATAA
. : . : . : . : . : . :
rJMSF048H01- TCAATCTTTTGTCGCCGTCTCTATCAAGATGCTTGTATGAGTTCTTTGATGTCATATCCT
____________________________________________________________
consensus TCAATCTTTTGTCGCCGTCTCTATCAAGATGCTTGTATGAGTTCTTTGATGTCATATCCT
. : . : . : . : . : . :
rJMSF048H01- TGGAGCTGAAGGAAGGTCAGAAGCAAAATAACTCCGGAGTTCCAAAAAGCATGAATAGTA
____________________________________________________________
consensus TGGAGCTGAAGGAAGGTCAGAAGCAAAATAACTCCGGAGTTCCAAAAAGCATGAATAGTA
. : . : . : . : . : . :
rJMSF048H01- ATTGGTGTAAGTAGATTTCGGGTTTGAGCATATGAAAATCCTAATGCAGTACCGAGTACA
____________________________________________________________
consensus ATTGGTGTAAGTAGATTTCGGGTTTGAGCATATGAAAATCCTAATGCAGTACCGAGTACA
. : . : . : . : . : . :
rJMSF048H01- AAAAGCTGAGGGAATTCTCCCGGTGTCAAATGTGCAGCAGAAAATACAGCAGCGCTGATA
____________________________________________________________
consensus AAAAGCTGAGGGAATTCTCCCGGTGTCAAATGTGCAGCAGAAAATACAGCAGCGCTGATA
. : . : . : . : . : . :
rJMSF048H01- AGGACAGCAAGTGGGCTAGGCAGCCACTTCGTCAGGGATACCATCAAAAAGCCTCTAAAC
____________________________________________________________
consensus AGGACAGCAAGTGGGCTAGGCAGCCACTTCGTCAGGGATACCATCAAAAAGCCTCTAAAC
. : . : . : . : . : . :
rJMSF048H01- ACCGTCTCCTCAAGAACTGGTGCAAGGACGCCAGTGATACCCAATAGACTCAGAGTGCTG
____________________________________________________________
consensus ACCGTCTCCTCAAGAACTGGTGCAAGGACGCCAGTGATACCCAATAGACTCAGAGTGCTG
. : . : . : . : . : . :
rJMSF048H01- ATGCTTGAAGAGCCAATCAATGGAAGCAAGCGAACTAGAGCATCAGTCTCTCTTGTCGGG
JMSF048H01+ GTCGGG
____________________________________________________________
consensus ATGCTTGAAGAGCCAATCAATGGAAGCAAGCGAACTAGAGCATCAGTCTCTCTTGTCGGG
. : . : . : . : . : . :
rJMSF048H01- GGTTCACTATTCAAAGAAGACATGGCAACTCCTGTCAGTGCAATAGCAGCCAGTGCTCCA
JMSF048H01+ GGTTCACTATTCAAAGAAGACATGGCAACTCCTGTCAGTGCAATAGCAGCCAGTGCTCCA
JMFS070C02+ GCAACTCCTGTCAGTGCAATAGCAGCCAGTGCTCCA
JMFS063F12+ GCAACTCCTGTCAGTGCAATAGCAGCCAGTGCTCCA
____________________________________________________________
consensus GGTTCACTATTCAAAGAAGACATGGCAACTCCTGTCAGTGCAATAGCAGCCAGTGCTCCA
. : . : . : . : . : . :
rJMSF048H01- GCAAGACCAATTGCTGCC
JMSF048H01+ GCAAGACCAATTGCTGCCCAAAACAGCCAACCTCTTTGAAGATTGAATGGCTCCCTCCAA
JMFS070C02+ GCAAGACCAATTGCTGCCCACAACAGCCAACCTCTTTGAAGATTGAATGGCTCCCTCCAA
JMFS063F12+ GCAAGACCAATTGCTGCCCACAACAGCCAACCTCTTTGAAGATTGAATGGCTCCCTCCAA
____________________________________________________________
consensus GCAAGACCAATTGCTGCCCACAACAGCCAACCTCTTTGAAGATTGAATGGCTCCCTCCAA
. : . : . : . : . : . :
JMSF048H01+ TCATAACAATATATGTCATTGGGAAGCGGCTTAGATGACTTGGTCAGGGTATAGAGAACT
JMFS070C02+ TCATAACAATATATGTCATTGGGAAGCGGCTTAGATGACTTGGTCAGGGTATAGAGAACT
JMFS063F12+ TCATAACAATATATGTCATTGGGAAGCGGCTTAGATGACTTGGTCAGGGTATAGAGAACT
____________________________________________________________
consensus TCATAACAATATATGTCATTGGGAAGCGGCTTAGATGACTTGGTCAGGGTATAGAGAACT
. : . : . : . : . : . :
JMSF048H01+ CCAAGAACAATTGCAGTTGTAATAGCTTGGTCTAGAAACAAAATTTCTGCCTTCTCATCC
JMFS070C02+ CCAAGAACAATTGCAGTTGTAATAGCTTGGTCTAGAAACAAAATTTCTGCCTTCTCATCC
JMFS063F12+ CCAAGAACAATTGCAGTTGTAATAGCTTGGTCTAGAAACAAAATTTCTGCCTTCTCATCC
____________________________________________________________
consensus CCAAGAACAATTGCAGTTGTAATAGCTTGGTCTAGAAACAAAATTTCTGCCTTCTCATCC
. : . : . : . : . : . :
JMSF048H01+ AAGCTTAGTTCTTCAACCTGAATTCCTGTGTACGGTATTGCTGCTGTCTCTATTAGTCCT
JMFS070C02+ AAGCTTAGTTCTTCAACCTGAATTCCTGTGTACGGTATTGCTGCTGTCTCTATTAGTCCT
JMFS063F12+ AAGCTTAGTTCTTCAACCTGAATTCCTGTGTACGGTATTGCTGCTGTCTCTATTAGTCCT
____________________________________________________________
consensus AAGCTTAGTTCTTCAACCTGAATTCCTGTGTACGGTATTGCTGCTGTCTCTATTAGTCCT
. : . : . : . : . : . :
JMSF048H01+ GTCAAAACAAAACTGAATCCACAAGCAAGGGAAGTAAGAGAAATAGTTTGCCAATTCCAT
JMFS070C02+ GTCAAAACAAAACTGAATCCACAAGCAAGGGAAGTAAGAGAAATAGTTTGCCAATTCCAT
JMFS063F12+ GTCAAAACAAAACTGAATCCACAAGCAAGGGAAGTAAGAGAAATAGTTTGCCAATTCCAT
____________________________________________________________
consensus GTCAAAACAAAACTGAATCCACAAGCAAGGGAAGTAAGAGAAATAGTTTGCCAATTCCAT
. : . : . : . : . : . :
JMSF048H01+ GGAACACTCCACCGTCTAAAAATTGGACAATTGGGTCCACTTCCTTTAGGGTCGGGTCGA
JMFS070C02+ GGAACACTCCACCGTCTAAAAATTGGACAATTGGGTCCACTTCCTTTAGGGTCGGGTCGA
JMFS063F12+ GGAACACTCCACCGTCTAAAAATTGGACAATTGGGTCCACTTCCTTTAGGGTCGGGTCGA
____________________________________________________________
consensus GGAACACTCCACCGTCTAAAAATTGGACAATTGGGTCCACTTCCTTTAGGGTCGGGTCGA
. : . : . : . : . : . :
JMSF048H01+ TTTCCGGATGAGTAAGAACAAACAGTAGTAGAGAAGCGCGGTCTGAGAGCTTGGTCGGTC
JMFS070C02+ TTTCCGGATGAGTAAGAACAAACAGTAGTAGAGAAGCGCGGTCTGAGAGCTTGGTCGGTC
JMFS063F12+ TTTCCGGATGAGTAAGAACAAACAGTAGTAGAGAAGCGCGGTCTGAGAGCTTGGTCGGTC
____________________________________________________________
consensus TTTCCGGATGAGTAAGAACAAACAGTAGTAGAGAAGCGCGGTCTGAGAGCTTGGTCGGTC
. : . : . : . : . : . :
JMSF048H01+ CGGCGAAATGAGAGCAATTGCAATTTCTGGGTCAGAGGCTTATATGGAAAAAGCTTTGGT
JMFS070C02+ CGGCGAAATGAGAGCAATTGCAATTTCTGGGTCAGAGGCTTATATGGAAAAAGCTTTGGT
JMFS063F12+ CGGCGAAATGAGAGCAATTGCAATTTCTGGGTCAGAGGCTTATATGGAAAAAGCTTTGGT
____________________________________________________________
consensus CGGCGAAATGAGAGCAATTGCAATTTCTGGGTCAGAGGCTTATATGGAAAAAGCTTTGGT
. : . : . : . : . : . :
JMSF048H01+ GAGAGTGATGCAATGGGAGCAGAGGGTCGAGCCAGAGAGACGTAGAACAACGCTGCTGCA
JMFS070C02+ GAGAGTGATGCAATGGGAGCAGAGGGTCGAGCCAGAGAGACGTAGAACAACGCTGCTGCA
JMFS063F12+ GAGAGTGATGCAATGGGAGCAGAGGGTCGAGCCAGAGAGACGTAGAACAACGCTGCTGCA
____________________________________________________________
consensus GAGAGTGATGCAATGGGAGCAGAGGGTCGAGCCAGAGAGACGTAGAACAACGCTGCTGCA
. : . : . : . : . : . :
JMSF048H01+ GCCATTTGGAGAATCGTAGGTTGAGAGATAAGGCAGATTAT
JMFS070C02+ GCCATTTGGAGAATCGTAGGTTGAGAGATAAGGCAGATTATGATCAAAGATTTGATTTTG
JMFS063F12+ GCCATTTGGAGAATCGTAGGTTGAGAGATAAGGCAGATTATGATCAAAGATTTGATTTTG
____________________________________________________________
consensus GCCATTTGGAGAATCGTAGGTTGAGAGATAAGGCAGATTATGATCAAAGATTTGATTTTG