Previous Contig 003147:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS035A09Sequence536003147 (2)
JMFS035C09Sequence579003147 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS035A09+ CTGAAAATTTCTGCCAGACACATANAATGTTCTACAACCAGAGAAGTAATTTGTAGGCTG
JMFS035C09+ AATGTTCTACAACCAGAGAAGTAATTTGTAGGCTG
                      ____________________________________________________________
consensus CTGAAAATTTCTGCCAGACACATANAATGTTCTACAACCAGAGAAGTAATTTGTAGGCTG
 
. : . : . : . : . : . :
JMFS035A09+ ATCTGCATCAGCTCAACCTCTAGGTCTGAGTTCCCAACTTCTTCAGCCGGAATCGGAGGG
JMFS035C09+ ATCTGCATCAGCTCAACCTCTAGGTCTGAGTTCCCAACTTCTTCAGCCGGAATCGGAGGG
                      ____________________________________________________________
consensus ATCTGCATCAGCTCAACCTCTAGGTCTGAGTTCCCAACTTCTTCAGCCGGAATCGGAGGG
 
. : . : . : . : . : . :
JMFS035A09+ GCTGAGATGTCGTTTTTGTTGGCTTCAAATCGCACCCGTTGAGGAGAAAGCTGACCTTGC
JMFS035C09+ GCTGAGATGTCGTTTTTGTTGGCTTCAAATCGCACCCGTTGAGGAGAAAGCTGACCTTGC
                      ____________________________________________________________
consensus GCTGAGATGTCGTTTTTGTTGGCTTCAAATCGCACCCGTTGAGGAGAAAGCTGACCTTGC
 
. : . : . : . : . : . :
JMFS035A09+ TGGGGAGCTATTGAAGGTGTCCGGATTGTGGCGTCTCTCTGTACGGAATTCTTCACCTGG
JMFS035C09+ TGGGGAGCTATTGAAGGTGTCCGGATTGTGGCGTCTCTCTGTACGGAATTCTTCACCTGG
                      ____________________________________________________________
consensus TGGGGAGCTATTGAAGGTGTCCGGATTGTGGCGTCTCTCTGTACGGAATTCTTCACCTGG
 
. : . : . : . : . : . :
JMFS035A09+ AGAGCAGATCTATCAAGTCCAAAGCTTCCAGCAGCTCGTCTCTGAATCTGAGCATATTAT
JMFS035C09+ AGAGCAGATCTATCAAGTCCAAAGCTTCCAGCAGCTCGTCTCTGAATCTGAGCATATTAT
                      ____________________________________________________________
consensus AGAGCAGATCTATCAAGTCCAAAGCTTCCAGCAGCTCGTCTCTGAATCTGAGCATATTAT
 
. : . : . : . : . : . :
JMFS035A09+ CACTCTCTAATTCTCTCTTTTTTTTAGAAAATTCTTCATTTCTCCAATTGTGTATTTAGT
JMFS035C09+ CACTCTCTAATTCTCTCTTTTTTTTAGAAAATTCTTCATTTCTCCAATTGTGTATTTAGT
                      ____________________________________________________________
consensus CACTCTCTAATTCTCTCTTTTTTTTAGAAAATTCTTCATTTCTCCAATTGTGTATTTAGT
 
. : . : . : . : . : . :
JMFS035A09+ TTGCGGCTCGTCTCCATCGTCTGAATTTCCACCTTGTCCAGCCGGCTTCAATGGTGAATG
JMFS035C09+ TTGCGGCTCGTCTCCATCGTCTGAATTTCCACCTTGTCCAGCCGGCTTCAATGGTGAATG
                      ____________________________________________________________
consensus TTGCGGCTCGTCTCCATCGTCTGAATTTCCACCTTGTCCAGCCGGCTTCAATGGTGAATG
 
. : . : . : . : . : . :
JMFS035A09+ GGGTAGGGTTTTGAGTTCGGGCTCTGATACCAATTGCAATGAACCTAAAAAATTGAGCAC
JMFS035C09+ GGGTAGGGTTTTGAGTTCGGGCTCTGATACCAATTGCAATGAACCTAAAAAATTGAGCAC
                      ____________________________________________________________
consensus GGGTAGGGTTTTGAGTTCGGGCTCTGATACCAATTGCAATGAACCTAAAAAATTGAGCAC
 
. : . : . : . : . : . :
JMFS035A09+ TAAAAGAAGGGAAAAAGAAAGCAGAACAGGATTGCAAGGGAGAAGGAGGAGAAGG
JMFS035C09+ TAAAAGAAGGGAAAAAGAAAGCAGAACAGGATTGCAAGGGAGAAGGAGGAGAAGGTAGAG
                      ____________________________________________________________
consensus TAAAAGAAGGGAAAAAGAAAGCAGAACAGGATTGCAAGGGAGAAGGAGGAGAAGGTAGAG
 
. : . : . : . : . : . :
JMFS035C09+ ATTGCAGAAGGGAGAGAAGAAGTTCTGAGAGGGTAGGGAAAGAGAGAGAATTGAGAGAAA
                      ____________________________________________________________
consensus ATTGCAGAAGGGAGAGAAGAAGTTCTGAGAGGGTAGGGAAAGAGAGAGAATTGAGAGAAA