Previous Contig 003008:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS020E02Sequence625003008 (2)
JMSF034K16Sequence686003008 (2)715011410 (2)gb:AX076881_14606692e-18Sequence 2 from Patent WO0107635.>gb:AX076883_1460670 Sequence 4 from Patent WO0

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034K16+ GAGCCGG
                      ____________________________________________________________
consensus GAGCCGG
 
. : . : . : . : . : . :
JMSF034K16+ TTAATTATCATCTCTATATCACTGTTGAATCCCATAGTTATAGTTACTTCATTCTCAGGC
                      ____________________________________________________________
consensus TTAATTATCATCTCTATATCACTGTTGAATCCCATAGTTATAGTTACTTCATTCTCAGGC
 
. : . : . : . : . : . :
JMSF034K16+ ACTAAAGCATTTTGGTAGGTATCCCAAACAGTAATGTTCTCTTTCTCAGGGTCTAAAGCA
                      ____________________________________________________________
consensus ACTAAAGCATTTTGGTAGGTATCCCAAACAGTAATGTTCTCTTTCTCAGGGTCTAAAGCA
 
. : . : . : . : . : . :
JMSF034K16+ GTTCTTTTTTTGCCCGCCAGGATCCATTCTTCAACATGCTCAATATCTCTTACCACATGT
                      ____________________________________________________________
consensus GTTCTTTTTTTGCCCGCCAGGATCCATTCTTCAACATGCTCAATATCTCTTACCACATGT
 
. : . : . : . : . : . :
JMSF034K16+ TTCAAGGTCTGATGAAGTTCTTCACTAGCCTGAGTAGCCTCAAATACATACCCTTTCACG
                      ____________________________________________________________
consensus TTCAAGGTCTGATGAAGTTCTTCACTAGCCTGAGTAGCCTCAAATACATACCCTTTCACG
 
. : . : . : . : . : . :
JMSF034K16+ TTTGCTGCCAAATATACTCGTCTCAGTTTATATTCTATTTCATTTTCGTAATAACTACTA
                      ____________________________________________________________
consensus TTTGCTGCCAAATATACTCGTCTCAGTTTATATTCTATTTCATTTTCGTAATAACTACTA
 
. : . : . : . : . : . :
JMSF034K16+ GAAATTCTAGATCGGATTGCGTCATGCAGAAATGAAATAGTAGTTATACACCTGGTGTCC
JMFS020E02+ C
                      ____________________________________________________________
consensus GAAATTCTAGATCGGATTGCGTCATGCAGAAATGAAATAGTAGTTATACACCTGGTGTCC
 
. : . : . : . : . : . :
JMSF034K16+ CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCAGAATGCAGAGCTTTGCA
JMFS020E02+ CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCAGAATGCAGAGCTTTGCA
                      ____________________________________________________________
consensus CCGTCATTCATTTTGGTGTCACATTCCTCCAAAAAGGTTTGCAGAATGCAGAGCTTTGCA
 
. : . : . : . : . : . :
JMSF034K16+ GACAGAAACTCGATCGTTTTAAGCAGCGACACCTTCATTCCTCCGGCATCAAAAATCAAA
JMFS020E02+ GACAGAAACTCGATCGTTTTAAGCAGCGACACCTTCATTCCTCCGGCATCAAAAATCAAA
                      ____________________________________________________________
consensus GACAGAAACTCGATCGTTTTAAGCAGCGACACCTTCATTCCTCCGGCATCAAAAATCAAA
 
. : . : . : . : . : . :
JMSF034K16+ AGTAGTGTGGGATCCACAAGGTCTTGCTCTACTATTTTGATTAGAGTGGTTACAGCATCA
JMFS020E02+ AGTAGTGTGGGATCCACAAGGTCTTGCTCTACTATTTTGATTAGAGTGGTTACAGCATCA
                      ____________________________________________________________
consensus AGTAGTGTGGGATCCACAAGGTCTTGCTCTACTATTTTGATTAGAGTGGTTACAGCATCA
 
. : . : . : . : . : . :
JMSF034K16+ AAAGCCATTATATTAAACTTCCCTAAAGTGTTTCTGGAACT
JMFS020E02+ AAAGCCATTATATTAAACTTCCCTAAAGTGTTTCTGGAACTGGTATCAGAGAGTTATTAT
                      ____________________________________________________________
consensus AAAGCCATTATATTAAACTTCCCTAAAGTGTTTCTGGAACTGGTATCAGAGAGTTATTAT
 
. : . : . : . : . : . :
JMFS020E02+ TAGTCTCAATTATTGAGCTAGAAAATAGCAGAGTAATGGTGCTTGCAAGATGGGTTAAAA
                      ____________________________________________________________
consensus TAGTCTCAATTATTGAGCTAGAAAATAGCAGAGTAATGGTGCTTGCAAGATGGGTTAAAA
 
. : . : . : . : . : . :
JMFS020E02+ CCTAAAGTTTTAAAATGGCGCACCTTAAGTACACAAATCAGTGCACACAAACAAAACACC
                      ____________________________________________________________
consensus CCTAAAGTTTTAAAATGGCGCACCTTAAGTACACAAATCAGTGCACACAAACAAAACACC
 
. : . : . : . : . : . :
JMFS020E02+ TTAAGAACATAAAACACGCACCTAAAGTTTTAAAATGGCGTACCTTAAATTTCAACAACT
                      ____________________________________________________________
consensus TTAAGAACATAAAACACGCACCTAAAGTTTTAAAATGGCGTACCTTAAATTTCAACAACT
 
. : . : . : . : . : . :
JMFS020E02+ GATGCACCTTAAGCATACAAATCACGTACCTTAAGAAGGAAAACAACGCACCTTACGAAG
                      ____________________________________________________________
consensus GATGCACCTTAAGCATACAAATCACGTACCTTAAGAAGGAAAACAACGCACCTTACGAAG
 
. : . : . : . : . : . :
JMFS020E02+ AAAAACCATGCACCTAAAACTTTAGGCCGACGCACCTTAAGCACACAAATCACGCACCTT
                      ____________________________________________________________
consensus AAAAACCATGCACCTAAAACTTTAGGCCGACGCACCTTAAGCACACAAATCACGCACCTT