Previous Contig 002782:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN016J16+                                            GAAATAAATAATGTTTATTAATTGCAA
rJMFF018B14-                                                      TGTTTATTAATTGC-A
rJMFF004L17-                                                      TGTTTATTAATTGCAA
                      ____________________________________________________________
consensus                                              GAAATAAATAATGTTTATTAATTGCAA
 
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JMFN016J16+           TCCATATATACATTACATATATATGAGTGGATTACATACAATCTAGCTTAGCTAGATAAT
rJMFF018B14-          TCCATATATACATTACATATATATGAGTGGATTACATACAATCTAGCTTAGCTAGATAAT
rJMFF004L17-          TCCATATATACATTACATATATATGAGTGGATTACATACAATCTAGCTTAGCTAGATAAT
                      ____________________________________________________________
consensus             TCCATATATACATTACATATATATGAGTGGATTACATACAATCTAGCTTAGCTAGATAAT
 
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JMFN016J16+           AATAACCTATCTACAAAATGAGAAATAATAATGAATTGAATCTCATGCATTATTATTGAT
rJMFF018B14-          AATAACCTATCTACAAAATGAGAAATAATAATGAATTGAATCTCATGCATTATTATTGAT
rJMFF004L17-          AATAACCTATCTACAAAATGAGAAATAATAATGAATTGAATCTCATGCATTATTATTGAT
                      ____________________________________________________________
consensus             AATAACCTATCTACAAAATGAGAAATAATAATGAATTGAATCTCATGCATTATTATTGAT
 
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JMFN016J16+           CGATCTGTAACGACGCACGCGAGTGGCCGGGCGGCAACTTAAATTATTTAGGCTGTGGGC
rJMFF018B14-          CGATCTGTAACGACGCACGCGAGTGGCCGGGCGGCAACTTAAATTATTTAGGCTGTGGGC
rJMFF004L17-          CGATCTGTAACGACGCACGCGAGTGGCCGGGCGGCAACTTAAATTATTTAGGCTGTGGGC
                      ____________________________________________________________
consensus             CGATCTGTAACGACGCACGCGAGTGGCCGGGCGGCAACTTAAATTATTTAGGCTGTGGGC
 
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JMFN016J16+           CTGCGGGTTTGCATTCAGCAGGAGGGTTGCCCCCGAAACGCTTGTTATCAGTGCAGTAAT
rJMFF018B14-          CTGCGGGTTTGCATTCAGCAGGAGGGTTGCCCCCGAAACGCTTGTTATCAGTGCAGTAAT
rJMFF004L17-          CTGCGGGTTTGCATTCAGCAGGAGGGTTGCCCCCGAAACGCTTGTTATCAGTGCAGTAAT
                      ____________________________________________________________
consensus             CTGCGGGTTTGCATTCAGCAGGAGGGTTGCCCCCGAAACGCTTGTTATCAGTGCAGTAAT
 
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JMFN016J16+           TGTAGACCCTATTCTTTGTTCGTACGCCTTGGAGTTTATTATTGGCATCGGCATCAAGCG
rJMFF018B14-          TGTAGACCCTATTCTTTGTTCGTACGCCTTGGAGTTTATTATTGGCATCGGCATCAAGCG
rJMFF004L17-          TGTAGACCCTATTCTTTGTTCGTACGCCTTGGAGTTTATTATTGGCATCGGCATCAAGCG
                      ____________________________________________________________
consensus             TGTAGACCCTATTCTTTGTTCGTACGCCTTGGAGTTTATTATTGGCATCGGCATCAAGCG
 
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JMFN016J16+           CATACTTTCCCCATGGCTTACTATCGGCGCAGGAGGAAGTTCCGACACAACCGTCGATAA
rJMFF018B14-          CATACTTTCCCCATGGCTTACTATCGGCGCAGGAGGAAGTTCCGACACAACCGTCGATAA
rJMFF004L17-          CATACTTTCCCCATGGCTTACTATCGGCGCAGGAGGAAGTTCCGACACAACCGTCGATAA
                      ____________________________________________________________
consensus             CATACTTTCCCCATGGCTTACTATCGGCGCAGGAGGAAGTTCCGACACAACCGTCGATAA
 
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JMFN016J16+           CAAAGTTTTTGTAGTAGGCAGTGAAGGGAGCTTTTGACCAATCTACCTTCACATCTCCTC
rJMFF018B14-          CAAAGTTTTTGTAGTAGGCAGTGAAGGGAGCTTTTGACCAATCTACCTTCACATCTCCTC
rJMFF004L17-          CAAAGTTTTTGTAGTAGGCAGTGAAGGGAGCTTTTGACCAATCTACCTTCACATCTCCTC
                      ____________________________________________________________
consensus             CAAAGTTTTTGTAGTAGGCAGTGAAGGGAGCTTTTGACCAATCTACCTTCACATCTCCTC
 
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JMFN016J16+           CCTGGGTTGCCCAATCAGACGCTTCCCACAAGCTGCAGAATACTTTCATGGGCTTGCTCT
rJMFF018B14-          CCTGGGTTGCCCAATCAGACGCTTCCCACAAGCTGCAGAATACTTTCATGGGCTTGCTCT
rJMFF004L17-          CCTGGGTTGCCCAATCAGACGCTTCCCACAAGCTGCAGAATACTTTCATGGGCTTGCTCT
JMFN043K24+               GGTTGCCCAATCAGACGCTTCCCACAAGCTGCAGAATACTTTCATGGGCTTGCTCT
                      ____________________________________________________________
consensus             CCTGGGTTGCCCAATCAGACGCTTCCCACAAGCTGCAGAATACTTTCATGGGCTTGCTCT
 
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JMFN016J16+           TTGGGAATGGAACCCCAACATTTTCGTGATTCTCGTATACTCTAATCGGAACGTTATCCA
rJMFF018B14-          TTGGGAATGGAACCCCAACATTTTCGTGATTCTCGTATACTCTAATCGGAACGTTATCCA
rJMFF004L17-          TTGGGAATGGAACCCCAACATTTTCGTGATTCTCGTATACTCTAATCGGAACGTTATCCA
JMFN043K24+           TTGGGAATGGAACCCCAACATTTTCGTGATTCTCGTATACTCTAATCGGAACGTTATCCA
                      ____________________________________________________________
consensus             TTGGGAATGGAACCCCAACATTTTCGTGATTCTCGTATACTCTAATCGGAACGTTATCCA
 
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JMFN016J16+           CCAACCAAACAAT                                               
rJMFF018B14-          CCAACCAAACAATTCTTTGTGAGTTCCAGATAATAGTGTAATCGTGATATGCGGCTGTTG
rJMFF004L17-          CCAACCAAACAATTCTTTGTGAGTTCCAGATAATAGTGTAATCGTGATATGCGGCTGTTG
JMFN043K24+           CCAACCAAACAATTCTTTGTGAGTTCCAGATAATAGTGTAATCGTGATATGCGGCTGTTG
                      ____________________________________________________________
consensus             CCAACCAAACAATTCTTTGTGAGTTCCAGATAATAGTGTAATCGTGATATGCGGCTGTTG
 
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rJMFF018B14-          GGTCAAACCAGAGATGGAACTGTTGCTCCCTGTCACCTTTCCCATCAGCAAATACATTGG
rJMFF004L17-          GGTCGAACCAGAGATGGAACTGTTGCTCCCTGTCACCTTTCCCATCAGCAAATACATTGG
JMFN043K24+           GGTCAAACCAGAGATGGAACTGTTGCTCCCTGTCACCTTTCCCATCAGCAAATACATTGG
                      ____________________________________________________________
consensus             GGTCAAACCAGAGATGGAACTGTTGCTCCCTGTCACCTTTCCCATCAGCAAATACATTGG
 
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rJMFF018B14-          TATGGACTGT                                                  
rJMFF004L17-          TATGGACTGTGTAAGGCTGAAAAGTAGCATTCCCTAAGAATTCAAAGTCCACTTCATCGT
JMFN043K24+           TATGGACTGTGTAAGGCTGAAAAGTAGCATTCCCTAAGAATTCAAAGTCCACTTCATCGT
                      ____________________________________________________________
consensus             TATGGACTGTGTAAGGCTGAAAAGTAGCATTCCCTAAGAATTCAAAGTCCACTTCATCGT
 
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rJMFF004L17-          GCGCTTGTCCT                                                 
JMFN043K24+           GCGCTTGTCCTATAGGTGATGTTAGATAGAAGGTGGTGACAGTGCCAGCCGAGAAGCCTT
                      ____________________________________________________________
consensus             GCGCTTGTCCTATAGGTGATGTTAGATAGAAGGTGGTGACAGTGCCAGCCGAGAAGCCTT
 
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JMFN043K24+           TCACTAACTTCATTTGCATGTCGAATCTGCCGAACAGGTACTCATTTTTGGTATTGAAAC
                      ____________________________________________________________
consensus             TCACTAACTTCATTTGCATGTCGAATCTGCCGAACAGGTACTCATTTTTGGTATTGAAAC
 
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JMFN043K24+           CAAAACCAGTTTGTTGGTCAAGATTCAGGGCCATCGTGTTGCCGTTGTCTTGCACTTGCC
                      ____________________________________________________________
consensus             CAAAACCAGTTTGTTGGTCAAGATTCAGGGCCATCGTGTTGCCGTTGTCTTGCACTTGCC
 
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JMFN043K24+           CAAGATGATTCCCAAAATACATTTGGACATCATTGTTGAAGTTAAGCGGGGGCGGGGGCA
                      ____________________________________________________________
consensus             CAAGATGATTCCCAAAATACATTTGGACATCATTGTTGAAGTTAAGCGGGGGCGGGGGCA
 
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JMFN043K24+           CGGCTAATGCCACACCTACCAGGCTGCACGCCACCACACCTATTATCATTATCATACAAA
                      ____________________________________________________________
consensus             CGGCTAATGCCACACCTACCAGGCTGCACGCCACCACACCTATTATCATTATCATACAAA