| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022L19 | Sequence | 488 | 002138 (8) | gb:AY056197_1563521 | 4e-40 | Arabidopsis thaliana unknown protein (At3g11700) mRNA, complete cds.>gb:AY058879 | 699 | 002431 (8) | gb:AY093189_1575143 | 8e-43 | Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds.>gb:BT006590 |
| JMFF043I24 | Sequence | 631 | 002138 (8) | gb:BT015342_1642170 | 3e-49 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | 576 | 002431 (8) | gb:AY093189_1575143 | 3e-14 | Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds.>gb:BT006590 |
| JMFF044B06 | Sequence | 628 | 002138 (8) | gb:BT015342_1642170 | 5e-50 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | 577 | 002431 (8) | gb:AY093189_1575143 | 3e-14 | Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds.>gb:BT006590 |
| JMFF050B16 | Sequence | 578 | 002138 (8) | gb:BT015342_1642170 | 7e-40 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | |||||
| JMFF051H12 | Sequence | 593 | 002138 (8) | gb:BT015342_1642170 | 2e-44 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | 435 | 002431 (8) | |||
| JMFF051H13 | Sequence | 594 | 002138 (8) | gb:BT015342_1642170 | 4e-42 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | 541 | 002431 (8) | gb:AY093189_1575143 | 2e-07 | Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds.>gb:BT006590 |
| JMFS053G11 | Sequence | 593 | 002138 (8) | gb:BT015342_1642170 | 4e-47 | Arabidopsis thaliana At5g06390 gene, complete cds.>gb:BT020253_1642648 Arabidops | |||||
| JMSF005G22 | Sequence | 277 | 002138 (8) | pir|T46107|T46107 | 1e-16 | hypothetical protein T25B15.140 - Arabidopsis thaliana>gb:ATT25B15_1555444 Arabi | 110 | 007791 (14) | |||
This contig is upended
. : . : . : . : . : . :
JMFS053G11+ NAAGTCCTTGACNNGGCTTNCGCCGTCGAAGCGGTGGTGGTGGCCGCCGGGGCCCGGGG
____________________________________________________________
consensus NAAGTCCTTGACNNGGCTTNCGCCGTCGAAGCGGTGGTGGTGGCCGCCGGGGCCCGGGG
. : . : . : . : . : . :
JMFS053G11+ CGGGCGCGGGAGCTATAGATGGGCCGGGGGCCATGGCGTCGTAGATGGGGAGAACGGGAG
____________________________________________________________
consensus CGGGCGCGGGAGCTATAGATGGGCCGGGGGCCATGGCGTCGTAGATGGGGAGAACGGGAG
. : . : . : . : . : . :
JMFS053G11+ GGGCGCCGGCGGGGACCGGGCCGGCGGGTTTCTTGAGACGGTGAGTCCTGGGGTCCACCT
____________________________________________________________
consensus GGGCGCCGGCGGGGACCGGGCCGGCGGGTTTCTTGAGACGGTGAGTCCTGGGGTCCACCT
. : . : . : . : . : . :
JMFS053G11+ CAGGGGCGCCGGTGGGGAGGACGGCGGAGATGGACCGCAAGCTCCGCCGCGTGTTGAAAT
____________________________________________________________
consensus CAGGGGCGCCGGTGGGGAGGACGGCGGAGATGGACCGCAAGCTCCGCCGCGTGTTGAAAT
. : . : . : . : . : . :
JMFS053G11+ CTTGCTGCACCGACTTGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
JMFF044B06+ TGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
JMFF051H13+ GATGATGCCGTC-GGGC
JMFF051H12+ GATGATGCCGTCGGGGC
JMFF043I24+ TGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
____________________________________________________________
consensus CTTGCTGCACCGACTTGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
. : . : . : . : . : . :
JMFS053G11+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
JMFF044B06+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
JMFF051H13+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTTTCCGACACAACGA
JMFF051H12+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCGNCTCACCTCCCTTTCNGACACAACGA
JMFF043I24+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
____________________________________________________________
consensus GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
. : . : . : . : . : . :
JMFS053G11+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF044B06+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF051H13+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF051H12+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF022L19+ GGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF043I24+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF050B16+ GCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
____________________________________________________________
consensus GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
. : . : . : . : . : . :
JMFS053G11+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF044B06+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF051H13+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF051H12+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF022L19+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF043I24+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF050B16+ TTCCGGGCCAGTGTTGGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
____________________________________________________________
consensus TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
. : . : . : . : . : . :
JMFS053G11+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF044B06+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF051H13+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF051H12+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF022L19+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF043I24+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF050B16+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
____________________________________________________________
consensus GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
. : . : . : . : . : . :
JMFS053G11+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGGGCCGGGAAACAG
JMFF044B06+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF051H13+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF051H12+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMSF005G22+ GGCGCAAAAATGGTGATATTGTGGCGGGAAACAGCTTCCT
JMFF022L19+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF043I24+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF050B16+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
____________________________________________________________
consensus GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
. : . : . : . : . : . :
JMFF044B06+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF051H13+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF051H12+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMSF005G22+ CGAGAGTCTGCAGCAAAAGCGCCTTCTCCACGAGCTCAGACAGCTCGGTATAATGCGAAT
JMFF022L19+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF043I24+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF050B16+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
____________________________________________________________
consensus CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
. : . : . : . : . : . :
JMFF044B06+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF051H13+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF051H12+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMSF005G22+ CCAGAAGCGCCACCAACACCGAGTTAGAATTGATCTGAGC
JMFF022L19+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF043I24+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF050B16+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
____________________________________________________________
consensus CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
. : . : . : . : . : . :
JMFF044B06+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF051H13+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF051H12+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF022L19+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF043I24+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF050B16+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
____________________________________________________________
consensus ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
. : . : . : . : . : . :
JMFF044B06+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF051H13+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF051H12+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF022L19+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF043I24+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF050B16+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
____________________________________________________________
consensus AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
. : . : . : . : . : . :
JMFF044B06+ TTGATTGCAGATTTGCACAACACCACACTACT
JMFF051H13+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF051H12+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF022L19+ TTGATTGCAGATTTGCACAACACCACACT
JMFF043I24+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF050B16+ TTGATTGCAGATTTGCACAACACCACACTACTCTCTATCTCTCTCTCTCTCTTTCTCTCT
____________________________________________________________
consensus TTGATTGCAGATTTGCACAACACCACACTACTCTCTATCTCTCTCTCTCTCTTTCTCTCT
. : . : . : . : . : . :
JMFF050B16+ TTAATATGGTGTGGGATAATGGGGAAGAAGAGCTGTATGTGTGGCAATTTGGTTGTATCC
____________________________________________________________
consensus TTAATATGGTGTGGGATAATGGGGAAGAAGAGCTGTATGTGTGGCAATTTGGTTGTATCC