Previous Contig 002122:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K16Sequence561002122 (2)gb:OSA312313_16925164e-18Oryza sativa putative B'kappa gene for protein phosphatase 2A B'kappa subunit, e756010926 (4)gb:OSA272423_16924304e-11Oryza sativa partial mRNA for putative B' regulatory subunit of PP2A (sircs1 gen
JMFF049L22Sequence646002122 (2)gb:OSA312313_16925161e-26Oryza sativa putative B'kappa gene for protein phosphatase 2A B'kappa subunit, e575010926 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF049L22+ CATTTCAAAGATCCCGAAGTAACGAAATCATTCAGCTCTGCTAAAA
                      ____________________________________________________________
consensus CATTTCAAAGATCCCGAAGTAACGAAATCATTCAGCTCTGCTAAAA
 
. : . : . : . : . : . :
JMFF002K16+ GGATCACTGAAATCATACACGG
JMFF049L22+ CCTGTCTCTTCAGATCTTTCTCCGCTGAGTTCTTATCCGGATCACTGAAATCATACACGG
                      ____________________________________________________________
consensus CCTGTCTCTTCAGATCTTTCTCCGCTGAGTTCTTATCCGGATCACTGAAATCATACACGG
 
. : . : . : . : . : . :
JMFF002K16+ AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTT
JMFF049L22+ AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTN
                      ____________________________________________________________
consensus AGCAGCAGAGGTTCAGTTTACTCAAAAACAAGCCTTGCTTTTCCCCATTCGAAACATCTT
 
. : . : . : . : . : . :
JMFF002K16+ TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
JMFF049L22+ TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
                      ____________________________________________________________
consensus TAAAGCACAAATGCGGTGCAATAGACTCCCCCCCTCCAGCCACAATGTTCGCTGGGAAAA
 
. : . : . : . : . : . :
JMFF002K16+ TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
JMFF049L22+ TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
                      ____________________________________________________________
consensus TCGCGGATGACATGCGTTTCACTACATTAAGCCGGTTCGCTATGACATTGCAGCTGTTTG
 
. : . : . : . : . : . :
JMFF002K16+ TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
JMFF049L22+ TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
                      ____________________________________________________________
consensus TAAACTGAACCCCATTGCCCGAGTTCGTAGGGTTGTTGAACGAATTGCTCAAAGACGAAT
 
. : . : . : . : . : . :
JMFF002K16+ CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
JMFF049L22+ CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
                      ____________________________________________________________
consensus CTTTTGGGTCCGATTTCAGTGATTTCCGAGGAATTTTCGCAAGAATTTGCTTAAGCATAG
 
. : . : . : . : . : . :
JMFF002K16+ TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
JMFF049L22+ TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
                      ____________________________________________________________
consensus TAGCAACGCTTGAAGTTGCAGCCAAGAGTGGACCTGGGTTAGTGTGGGTCTGATGAGCGA
 
. : . : . : . : . : . :
JMFF002K16+ TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
JMFF049L22+ TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
                      ____________________________________________________________
consensus TGAGGAAAGAAGAAAAGGGCATAAAGATTCCTGGGAGAATTAGCAGAGATGAATAAGAAG
 
. : . : . : . : . : . :
JMFF002K16+ AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
JMFF049L22+ AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
                      ____________________________________________________________
consensus AAGAAGAAGAAGAAGAAGAGAATGCAGGAATACTAAAACCAGCAGGGAGAGAGAGGGGAG
 
. : . : . : . : . : . :
JMFF002K16+ AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAG
JMFF049L22+ AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC
                      ____________________________________________________________
consensus AGTGTGGAATCACATCACATCATGGTCTTCCTCTTTTAGCTTTGAATTGAAGACACAAGC