| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF036C15 | Sequence | 570 | 001701 (2) | gb:AY366397_1602904 | 1e-60 | Nicotiana tabacum ntp101 (pntp101) mRNA, complete cds.>gb:AY366399_1602906 Nicot | 689 | 009894 (2) | gb:AF049931_1764130 | 6e-73 | Petunia x hybrida PGPS/NH15 (PGPS/NH15) mRNA, partial cds. |
| JMFF039L05 | Sequence | 584 | 001701 (2) | gb:AF479568_1803525 | 1e-68 | Petunia x hybrida 1-ascorbate oxidase (p303) gene, complete cds. | 724 | 009894 (2) | gb:AY366397_1602904 | 8e-81 | Nicotiana tabacum ntp101 (pntp101) mRNA, complete cds.>gb:AY366399_1602906 Nicot |
This contig is upended
. : . : . : . : . : . :
JMFF036C15+ GGGAT
JMFF039L05+ ACTGATAAAAACATTGAATTCATCCGCGGGGGAATCAAACGGGAC
____________________________________________________________
consensus ACTGATAAAAACATTGAATTCATCCGCGGGGGAATCAAACGGGAT
. : . : . : . : . : . :
JMFF036C15+ AGGGATGAGTTCACGACTGTGGACATTGATAGGGCCATAGCCACCCGCCGCGCGTTGCAA
JMFF039L05+ CGGGATGAGGTCACGACTGTGGACATTGATAGGGCCATAGCCGCCGGCCGCGCGTTGCAA
____________________________________________________________
consensus CGGGATGAGTTCACGACTGTGGACATTGATAGGGCCATAGCCGCCGGCCGCGCGTTGCAA
. : . : . : . : . : . :
JMFF036C15+ GCCGGTGGTGGGGAAGTAGAAATAGGTGCCAATCTGGTCCTTGACTTGCATCTTGTAGGT
JMFF039L05+ GCCGGTGGTGGGGAAGTAGAAATAGGTGCCAATCTGGTCCTTGACTTGCACCTTGTAGGT
____________________________________________________________
consensus GCCGGTGGTGGGGAAGTAGAAATAGGTGCCAATCTGGTCCTTGACTTGCATCTTGTAGGT
. : . : . : . : . : . :
JMFF036C15+ GAAGTTGGTTCCGGGCATTATCGGGCACATGGTCCCAATAGTCCCATCAACCCATGAATT
JMFF039L05+ GAAGTTGGTGCCGGGCATGATAGGGCACATGGTCCCAATAGTCCCATCAACCCATGAATT
____________________________________________________________
consensus GAAGTTGGTTCCGGGCATTATCGGGCACATGGTCCCAATAGTCCCATCAACCCATGAATT
. : . : . : . : . : . :
JMFF036C15+ CTTCCTCTGTTTGAATGCCGCTCCACGTCAAGAGCAGAGGCTCATCCAGCTCGTTGAAAA
JMFF039L05+ CTTCCTCTG-TTGAATGCCGCTCCACGTCAAGAGCAGAGGCTCATCCAGCTCGTTGAAAA
____________________________________________________________
consensus CTTCCTCTGTTTGAATGCCGCTCCACGTCAAGAGCAGAGGCTCATCCAGCTCGTTGAAAA
. : . : . : . : . : . :
JMFF036C15+ CGTTAACAATAATGTTATTATTAGATGTACAATTGATCTTAGGACCTGGGAACTGGCCGT
JMFF039L05+ CGTTAACAATAATGTTGTTGTTGGATGTGCAATTGATCATAGGACCTGGGAACTGGCCAT
____________________________________________________________
consensus CGTTAACAATAATGTTGTTGTTGGATGTGCAATTGATCTTAGGACCTGGGAACTGGCCGT
. : . : . : . : . : . :
JMFF036C15+ TGATGAGGATGCCTTGTTGGGGGACGCCCATGGGGGAAATGGTGCCATAGGTCACCTTCC
JMFF039L05+ TAATGAGGATGCCCTGTTGGGGGAAGCCCATGGGAGAAATGGTGCCATAGGTTACCTTCC
____________________________________________________________
consensus TGATGAGGATGCCTTGTTGGGGGACGCCCATGGGGGAAATGGTGCCATAGGTTACCTTCC
. : . : . : . : . : . :
JMFF036C15+ AAGTGAAGAA
JMFF039L05+ ACGTGAAGAACAAGTAGGGGTCCTCCGCTATTACGGCGGAGAGACACAGCAAGAGCACCA
____________________________________________________________
consensus ACGTGAAGAACAAGTAGGGGTCCTCCGCTATTACGGCGGAGAGACACAGCAAGAGCACCA
. : . : . : . : . : . :
JMFF039L05+ CCGCTGAGGTTGCGCAAGCTCGCCCCATGGCTCCCCCCGGAACCTTCCCTTTATTTATTC
____________________________________________________________
consensus CCGCTGAGGTTGCGCAAGCTCGCCCCATGGCTCCCCCCGGAACCTTCCCTTTATTTATTC
. : . : . : . : . : . :
JMFF039L05+ AAGAAGAAGCGCAGATAGAGATGGGGCGTTTTATTCGTCTTCTTCTTGTTGCTAGAGCTT
____________________________________________________________
consensus AAGAAGAAGCGCAGATAGAGATGGGGCGTTTTATTCGTCTTCTTCTTGTTGCTAGAGCTT